DRSC/TRiP Functional Genomics Resources

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Protein Alignment FER and Ripk1

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_001100820.1 Gene:Ripk1 / 306886 RGDID:1310158 Length:658 Species:Rattus norvegicus


Alignment Length:280 Identity:79/280 - (28%)
Similarity:133/280 - (47%) Gaps:41/280 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly  1057 ELSNDDVVLLER--IGRGNFGDVYKAKLKSTKLDVAVKTCRMTLPD--EQKRKFLQEGRILKQYD 1117
            ::::||  ||||  :..|.||.|.....::....:..|.  .|.|:  |.....|:||:::.:..
  Rat    11 KMASDD--LLERKDLDSGGFGKVSLCFHRTHGFVILKKV--YTGPNRAEYNEALLEEGKMMHRLR 71

  Fly  1118 HPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLR-KNSNGLTTRQQMGMCRDAAAGMRYLESKNC 1181
            |..:|||:||.:::....:|||.:..|:|:..|: |.|..|:.:.::.:  :...||.||..:..
  Rat    72 HDRVVKLLGIIIEEGNYSLVMEYMEQGNLMHVLKTKESVPLSVKGRIIV--EIIEGMHYLHDEGV 134

  Fly  1182 IHRDLAARNCLVDLEHSVKISDFGMSR-------EEEEYIVSDGMKQIPVK------WTAPEALN 1233
            ||:||...|.|||.:..:||:|.|::.       .:||:........:..|      :.|||.|.
  Rat   135 IHKDLKPENILVDRDFHIKIADLGVASFKTWSKLTKEEHNKQREASSVTKKNGGTLYYMAPEHLT 199

  Fly  1234 --FGKYTSLCDVWSYGILMWEIFSKGDTPYSGM---------TNSRARERIDTGYRMPTPKSTPE 1287
              ..|.|...||:|:.|::|.||:..: ||..:         .||..|..::     ...:..|.
  Rat   200 DINTKPTEKSDVYSFAIVLWAIFANKE-PYENVICTEQFLVCINSGNRPNVE-----DILEFCPR 258

  Fly  1288 EMYRLMLQCWAADAESRPHF 1307
            |:..||.:||..:.|.||.|
  Rat   259 EIISLMERCWQTNPEDRPTF 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224
TyrKc 1063..1311 CDD:197581 77/274 (28%)
PTKc_Fes_like 1067..1315 CDD:270637 75/270 (28%)
Ripk1NP_001100820.1 PKc_like 23..290 CDD:419665 73/266 (27%)
Death_RIP1 570..655 CDD:260048
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100013
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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