DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and Fer

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_001382687.1 Gene:Fer / 301737 RGDID:1306273 Length:823 Species:Rattus norvegicus


Alignment Length:1329 Identity:342/1329 - (25%)
Similarity:527/1329 - (39%) Gaps:523/1329 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGFSSALQSRAAHEALIVRQDAELRLMETMKRSIQMKAKCDKEYAISLTAVAQQGLKIDRADEMQ 65
            |||.|.|::  :.||::..||.||||:||:|:.:.::.|.|||||.:|..:..|   :|:...:|
  Rat     1 MGFGSDLKN--SQEAVLKLQDWELRLLETVKKFMALRIKSDKEYAYTLQNLCNQ---VDKDSTVQ 60

  Fly    66 ---GSLISKSWRSYMDELDHQAKQFKFNAEQLEV-VCDKLTHLSQDKRKARKAYQEEHAKIAARL 126
               .|.:||||...:.:.:..::..|.:||.|.. ...:||.:.:||::.:|:|...|.:|.|.:
  Rat    61 VNYVSNVSKSWLLMIQQTEQLSRIMKTHAEDLNSGPLHRLTMMIKDKQQVKKSYVGIHQQIEAEM 125

  Fly   127 NHLT-DEVVRKKSEYQKHLEGYKALRTRFEENYIKAPSRSGRKLDDVRDKYQKACRKLHLTHNEY 190
            ..:| .|:.:.||.|::.::...:.:.:::|...|     |::.:..:::..||..|||:.||:|
  Rat   126 IKVTKTELEKLKSSYRQLIKEMNSAKEKYKEALAK-----GKETEKAKERCDKATMKLHMLHNQY 185

  Fly   191 VLSITEAIEVEKDFRNVLLPGLLEHQQSVQESFILLWRNILQEAAQYGDLTADKYKEIQKRIDTV 255
            ||::..|...:..:.:..||.||:..|.:||..|...:.|..|.::...|..::...:.|.|...
  Rat   186 VLALKGAQLHQSQYYDTTLPLLLDSVQKMQEEMIKALKGIFDEYSEITSLVTEEIVNVHKEIQMS 250

  Fly   256 IGSINPTEEYGEFTEKYKTSPTTPLLFQFDETLIQDIPGKLQSSTLTVDNLTVDWLRNRLQELEG 320
            :..|:|:.||.:|.:.::|:.......:||.:|::: ...||::.:..:|||.|.|:..|:.|..
  Rat   251 VDQIDPSTEYNDFIDVHRTTAAKEQEIEFDTSLLEE-NENLQANEIMWNNLTADSLQVMLKTLAE 314

  Fly   321 AVRDCQE----KQMKMIEHVNGGSPVANGSIISNGSNTSNGIQSNKDSLCRQSKDLNALRCQEKQ 381
            .:...|:    |:..::|                   ....|:.:.:: |.:..|:..|.   .|
  Rat   315 ELTQTQQMLLHKEAAVLE-------------------LEKRIEESSET-CAKKSDIVLLL---GQ 356

  Fly   382 KQKLVDMIKCALNEVGCEELPSGCDDDLTLEQNFIENGYNNEQQRSNSTSSPGLGIMNELMRRGG 446
            ||.| :.:|.::.::.|.|.......:| |||...||                            
  Rat   357 KQAL-EELKQSVQQLRCTEAKCAAQKEL-LEQKVQEN---------------------------- 391

  Fly   447 VLTLLRGRGRHFKRKSTPQPATPMTRSRQGRFNKLQPRSQSLGSLSVIRDGNGPSPARYEPITNH 511
                                                             ||..|.|.        
  Rat   392 -------------------------------------------------DGKEPPPV-------- 399

  Fly   512 RLRQAASVHYLGEEIATSSTNPPDLTRLRRTQCSMLCLGEDEEPVVLASPAPLTQLTAAVLTNTN 576
                   |:|  ||.|.|.|:                                            
  Rat   400 -------VNY--EEDARSVTS-------------------------------------------- 411

  Fly   577 NNHIYADLELDKKKDTSPSPECKGEQIQPKKEQIRIEINQTAPQNSIDAHLDRIDELNRVLDDRL 641
                     :::|:..|            |.|.||                              
  Rat   412 ---------MERKERLS------------KFESIR------------------------------ 425

  Fly   642 KRTLQPSDDVNAIESAEENHIQTRKLAKDPDSQTKRSSSSSSECRSSKDTSHSKKRSLSFSQKSI 706
                                                                          .||
  Rat   426 --------------------------------------------------------------HSI 428

  Fly   707 SNIFSNLKEFSKSPLVRMGKNHILNEEQDAKRTQPSQHHHSSGSDCPTNSSSSSSNNNNNNKNTS 771
            :.|.       |||                                                   
  Rat   429 AGII-------KSP--------------------------------------------------- 435

  Fly   772 SNSNHSASQSTIITSTITTTITTTTTTTPSKENSRLKFKVPKIQKKSKAIRNTFRSKLLNFQLKR 836
                                                                             
  Rat   436 ----------------------------------------------------------------- 435

  Fly   837 SKPCKQCTKRRRIHPSKSVFDFAKEFEVEQPAGSAADEQFCNCPPAGQKPVKPSVQISGHKDHPF 901
                            |||.            ||                   |.|:|       
  Rat   436 ----------------KSVL------------GS-------------------STQLS------- 446

  Fly   902 ESSSGELDENSDRDIDNDEEEEDSASDDVLSMKDHCYCVPSLAASISLSTNRPLYEEEWFHGVLP 966
                                       ||:|:.:                 :||.|.:|:||.:|
  Rat   447 ---------------------------DVISVGE-----------------KPLAEHDWYHGAIP 467

  Fly   967 REEVVRLLNNDGDFLVRETIRNEESQIVLSVCWNG-HKHFIVQTTGEGNFRFEGPPFASIQELIM 1030
            |.|...||...|||||||: ..:..:.||||..:| .:|||:|.. :..:||||..|::|.:||.
  Rat   468 RIEAQELLKQQGDFLVRES-HGKPGEYVLSVYSDGQRRHFIIQFV-DNLYRFEGTGFSNIPQLID 530

  Fly  1031 HQYHSELPVTVKSGAILRRPVCRE-RWELSNDDVVLLERIGRGNFGDVYKAKLKSTKLDVAVKTC 1094
            |.::::..:|.|||.:|..|:.:: :|.|:::||.|.|.:|:||||:|||..||. |..||||||
  Rat   531 HHFNTKQVITKKSGVVLLNPIPKDKKWVLNHEDVSLGELLGKGNFGEVYKGTLKD-KTPVAVKTC 594

  Fly  1095 RMTLPDEQKRKFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSNGLTT 1159
            :..||.|.|.|||||.:|||||||||||||||:|.|:||:.|:||||.||..|::|||..:.|..
  Rat   595 KEDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPVYIIMELVPGGDFLSFLRKRKDELKL 659

  Fly  1160 RQQMGMCRDAAAGMRYLESKNCIHRDLAARNCLVDLEHSVKISDFGMSREEEEYIV-SDGMKQIP 1223
            :|.:....|.||||.|||.|||||||||||||||...:::|||||||||:|:..:. |.|:||||
  Rat   660 KQLVRFSLDVAAGMLYLEGKNCIHRDLAARNCLVGENNTLKISDFGMSRQEDGGVYSSSGLKQIP 724

  Fly  1224 VKWTAPEALNFGKYTSLCDVWSYGILMWEIFSKGDTPYSGMTNSRARERIDTGYRMPTPKSTPEE 1288
            :|||||||||:|:|:|..||||:|||:||.||.|..||.||||.:|||:::.||||..|::.|||
  Rat   725 IKWTAPEALNYGRYSSESDVWSFGILLWETFSLGVCPYPGMTNQQAREQVERGYRMSAPQNCPEE 789

  Fly  1289 MYRLMLQCWAADAESRPHFDEIYNVVDAL 1317
            ::.:|::||....|:||.|.:::..:.|:
  Rat   790 IFTIMMKCWDYKPENRPKFSDLHKELTAI 818

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341 70/240 (29%)
SH2_Fps_family 953..1039 CDD:198224 36/86 (42%)
TyrKc 1063..1311 CDD:197581 148/248 (60%)
PTKc_Fes_like 1067..1315 CDD:270637 146/248 (59%)
FerNP_001382687.1 Important for interaction with membranes containing phosphoinositides. /evidence=ECO:0000250 1..300 87/309 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 309 1.000 Domainoid score I1288
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H74300
Inparanoid 1 1.050 540 1.000 Inparanoid score I1140
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D255116at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 1 1.000 - - otm46212
orthoMCL 1 0.900 - - OOG6_100013
Panther 1 1.100 - - O PTHR24418
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1749
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.970

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