DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and Zap70

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_006244823.1 Gene:Zap70 / 301348 RGDID:3983 Length:638 Species:Rattus norvegicus


Alignment Length:524 Identity:153/524 - (29%)
Similarity:229/524 - (43%) Gaps:104/524 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   861 EFEVEQPAGSAAD-EQFCNCPPAGQKPVKPSVQISGHKDHPFESSSGELDENSDRDIDND--EEE 922
            :|..:.|.|...: .:.||.|| |.:| :|.|         |:.    |.:...||....  :.|
  Rat   109 QFYSQDPDGLPCNLRKPCNRPP-GLEP-QPGV---------FDC----LRDAMVRDYVRQTWKLE 158

  Fly   923 EDSASDDVLSMKDHCYCVPSLAASISLSTNRPLYEEEWFHGVLPREEVVRLL----NNDGDFLVR 983
            .|:....::|.      .|.:...|:.:.:..:   .|:|..|.|||..|.|    ..||.||:|
  Rat   159 GDALEQAIISQ------APQVEKLIATTAHERM---PWYHSSLTREEAERKLYSGQQTDGKFLLR 214

  Fly   984 ETIRNEESQIVLSVCWNGH-KHFIVQTTGEGNFRF-EGPPFASIQELIMH--------------- 1031
            .  |.|:....||:.:... .|:::.....|.:.. ||..|.::.:|:.:               
  Rat   215 P--RKEQGTYALSLVYGKTVYHYLISQDKAGKYCIPEGTKFDTLWQLVEYLKLKADGLIYRLKEV 277

  Fly  1032 -----------------------QYHSELPVTVKSG-----AILRRP--------VCRERW---E 1057
                                   |.|..:......|     |.|.:|        |....:   |
  Rat   278 CPNSSASAEAAAPTLPAHPSTFTQPHRRIDTLNSDGYTPEPARLDKPRPMPMDTSVYESPYSDPE 342

  Fly  1058 LSNDDVVLLER---------IGRGNFGDVYKA--KLKSTKLDVAVKTCRMTLPDEQKRKFLQEGR 1111
            ...|..:.|:|         :|.||||.|.:.  :::..::|||:|..:.:.....|.:.::|.:
  Rat   343 ELKDKKLFLKRENLLVADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQSTEKADKDEMMREAQ 407

  Fly  1112 ILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSNGLTTRQQMGMCRDAAAGMRYL 1176
            |:.|.|:|.||:|||:| |.:.:|:|||:..||.|..:|......:.......:....|.||:||
  Rat   408 IMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLIGKKEEIPVSNVAELLHQVAMGMKYL 471

  Fly  1177 ESKNCIHRDLAARNCLVDLEHSVKISDFGMSR---EEEEYIVSDGMKQIPVKWTAPEALNFGKYT 1238
            |.||.:||||||||.|:...|..||||||:|:   .::.|..:....:.|:||.|||.:||.|::
  Rat   472 EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 536

  Fly  1239 SLCDVWSYGILMWEIFSKGDTPYSGMTNSRARERIDTGYRMPTPKSTPEEMYRLMLQCWAADAES 1303
            |..||||||:.|||.||.|..||..|......:.|..|.||..|...|.|||.||..||....|.
  Rat   537 SRSDVWSYGVTMWEAFSYGQKPYKKMKGPEVLDFIKQGKRMECPPECPPEMYALMSDCWIYKWED 601

  Fly  1304 RPHF 1307
            ||.|
  Rat   602 RPDF 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 25/129 (19%)
TyrKc 1063..1311 CDD:197581 101/259 (39%)
PTKc_Fes_like 1067..1315 CDD:270637 100/255 (39%)
Zap70XP_006244823.1 SH2_N-SH2_Zap70_Syk_like 32..135 CDD:198191 9/27 (33%)
SH2 176..280 CDD:301589 24/108 (22%)
PTKc_Zap-70 352..620 CDD:270686 100/255 (39%)
Pkinase_Tyr 362..612 CDD:285015 99/245 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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