DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and Ntrk2

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_008769647.1 Gene:Ntrk2 / 25054 RGDID:3213 Length:837 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224
TyrKc 1063..1311 CDD:197581
PTKc_Fes_like 1067..1315 CDD:270637
Ntrk2XP_008769647.1 LRR_8 92..150 CDD:404697
TPKR_C2 152..195 CDD:407151
Ig 205..283 CDD:416386
Ig strand A' 205..209 CDD:409353
Ig strand B 212..221 CDD:409353
Ig strand D 238..243 CDD:409353
Ig strand E 244..254 CDD:409353
Ig strand F 261..270 CDD:409353
Ig strand G 273..283 CDD:409353
IgI_TrkB_d5 286..379 CDD:409441
Ig strand B 301..305 CDD:409441
Ig strand C 314..318 CDD:409441
Ig strand E 344..348 CDD:409441
Ig strand F 358..363 CDD:409441
Ig strand G 371..374 CDD:409441
PTKc_TrkB 547..834 CDD:270675
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.