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Protein Alignment FER and Erbb2

DIOPT Version :9

Sequence 1:	NP_524288.3	Gene:	FER / 41118	FlyBaseID:	FBgn0000723	Length:	1325	Species:	Drosophila melanogaster
Sequence 2:	NP_058699.2	Gene:	Erbb2 / 24337	RGDID:	2561	Length:	1259	Species:	Rattus norvegicus

Alignment Length:	281	Identity:	93/281 - (33%)
Similarity:	154/281 - (54%)	Gaps:	15/281 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly  1038 PVTVKSGAILRRPVCRERWELSNDDVVLLERIGRGNFGDVYKA----KLKSTKLDVAVKTCRMTL 1098
            |:| .|||:..:...|   .|...::..::.:|.|.||.|||.    ..::.|:.||:|..|...
  Rat   703 PLT-PSGAMPNQAQMR---ILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT 763

  Fly  1099 PDEQKRKFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSNGLTTRQQM 1163
            ..:..::.|.|..::.....|.:.:|:|||: ...:.:|.:|:..|.||.::|::...|.::..:
  Rat   764 SPKANKEILDEAYVMAGVGSPYVSRLLGICL-TSTVQLVTQLMPYGCLLDHVREHRGRLGSQDLL 827

  Fly  1164 GMCRDAAAGMRYLESKNCIHRDLAARNCLVDLEHSVKISDFGMSR----EEEEYIVSDGMKQIPV 1224
            ..|...|.||.|||....:||||||||.||...:.|||:|||::|    :|.||....|  ::|:
  Rat   828 NWCVQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGG--KVPI 890

  Fly  1225 KWTAPEALNFGKYTSLCDVWSYGILMWEIFSKGDTPYSGMTNSRARERIDTGYRMPTPKSTPEEM 1289
            ||.|.|::...::|...||||||:.:||:.:.|..||.|:......:.::.|.|:|.|.....::
  Rat   891 KWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDV 955

  Fly  1290 YRLMLQCWAADAESRPHFDEI 1310
            |.:|::||..|:|.||.|.|:
  Rat   956 YMIMVKCWMIDSECRPRFREL 976

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.