DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and Egfr

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_113695.2 Gene:Egfr / 24329 RGDID:2543 Length:1209 Species:Rattus norvegicus


Alignment Length:1209 Identity:255/1209 - (21%)
Similarity:426/1209 - (35%) Gaps:370/1209 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 THNEYVLSITEAIEVEKDFRN--VLLPGLLEHQQSVQESFILLWRNILQEAAQYGDLTADKYKEI 248
            |..::.||:      ::.|.|  |:| |.||... ||.::.|.:...:||.|.|..:..:..:.|
  Rat    43 TFEDHFLSL------QRMFNNCEVVL-GNLEITY-VQRNYDLSFLKTIQEVAGYVLIALNTVERI 99

  Fly   249 Q-KRIDTVIGSINPTEEYG-EFTEKYKTSPT----TPLLFQFDETLIQDIPGKLQSSTLTVDNLT 307
            . :.:..:.|:......|. .....|.|:.|    .|:. ...|.||..:  :..::.:..:..|
  Rat   100 PLENLQIIRGNALYENTYALAVLSNYGTNKTGLRELPMR-NLQEILIGAV--RFSNNPILCNMET 161

  Fly   308 VDWLRNRLQE--LEGAVRDCQEKQMKMIEHVNGGSPVANGSIISNGSNTSNGIQSNKDSLCRQ-S 369
            :.| |:.:|:  |.....|.|       .|:. |.|..:.| ..|||....|.::     |:: :
  Rat   162 IQW-RDIVQDVFLSNMSMDVQ-------RHLT-GCPKCDPS-CPNGSCWGRGEEN-----CQKLT 211

  Fly   370 KDLNALRCQEKQKQKLVDMIKCALNEVGCEELPSGC----DDDLTLEQNFIENGYNNEQQRSNST 430
            |.:.|.:|..:.:.:  ....|..|:..     :||    :.|..:...|          |..:|
  Rat   212 KIICAQQCSRRCRGR--SPSDCCHNQCA-----AGCTGPRESDCLVCHRF----------RDEAT 259

  Fly   431 ---SSPGLGIMNELMRRGGVLTLLRGRGRHFKRKSTPQPAT-PMTRSRQGRFNKLQPRSQSLGSL 491
               :.|.|.:.|                          |.| .|..:.:|::        |.|:.
  Rat   260 CKDTCPPLMLYN--------------------------PTTYQMDVNPEGKY--------SFGAT 290

  Fly   492 SVIRDGNGPSPARYEPITNHR--LRQAASVHYLGEEIATSSTNPPDLTRLRRTQCSMLC----LG 550
            .|.:     .|..| .:|:|.  :|.....:|..||...|.....|      ..|..:|    :|
  Rat   291 CVKK-----CPRNY-VVTDHGSCVRACGPDYYEVEEDGVSKCKKCD------GPCRKVCNGIGIG 343

  Fly   551 EDEEPVVLASPAPLTQLTAAVLTNTNNNH------IYADLEL-------DKKKDTSPSPECKGEQ 602
            |.::.:.:.:              ||..|      |..||.:       |....|.|....:.|.
  Rat   344 EFKDTLSINA--------------TNIKHFKYCTAISGDLHILPVAFKGDSFTRTPPLDPRELEI 394

  Fly   603 IQPKKEQIRIEINQTAPQNSIDAHLDRIDELNRVLDDRLKRTLQPSDDVNAIESAEENHIQTRKL 667
            ::..||.....:.|..|:|..|.|.....|:.|      .||.|......|:.......:..|.|
  Rat   395 LKTVKEITGFLLIQAWPENWTDLHAFENLEIIR------GRTKQHGQFSLAVVGLNITSLGLRSL 453

  Fly   668 AKDPDSQTKRSSSSSSECRSSKDTSHSKKRSLSFSQKSISNIFSNLKEFSKSPLVRMGKNHILNE 732
            .:..|.                |...|..|:|.::..      .|.|:...:|   ..|..|:|.
  Rat   454 KEISDG----------------DVIISGNRNLCYANT------INWKKLFGTP---NQKTKIMNN 493

  Fly   733 --EQDAKRTQPSQHHHSSGSDC--PTNSSSSSSNNNNNNKNTSSNSNHSASQSTIITSTITTTIT 793
              |:|.|.|....:...|...|  |..:...|..|.:..:......|....:             
  Rat   494 RAEKDCKATNHVCNPLCSSEGCWGPEPTDCVSCQNVSRGRECVDKCNILEGE------------- 545

  Fly   794 TTTTTTPSK--ENSRLKFKVPKIQKKSKAIRNTFRSKLLNFQLKRSKPCKQCTKRRRIHPSKSVF 856
                  |.:  |||.                                 |.||      ||.    
  Rat   546 ------PREFVENSE---------------------------------CIQC------HPE---- 561

  Fly   857 DFAKEFEVEQPAGSAADEQFCNCPPAGQKPVKPSVQISGHKDHPF---ESSSGELDENSD----- 913
                           ...|..|....|:.| ...::.:.:.|.|.   ...||.:.||:.     
  Rat   562 ---------------CLPQTMNITCTGRGP-DNCIKCAHYVDGPHCVKTCPSGIMGENNTLVWKF 610

  Fly   914 RDIDNDEEEEDSASDDVLSMKDHCYC-------------------VPSLAASISLSTNRPLYEEE 959
            .|.:|            :....|..|                   :||:|..|   ....|:...
  Rat   611 ADANN------------VCHLCHANCTYGCAGPGLKGCQQPEGPKIPSIATGI---VGGLLFIVV 660

  Fly   960 WFHGV---LPREEVVRLLNNDGDFLVRETIRN--EESQIVLSVCWNGHKHFIVQTTGEGNFRFEG 1019
            ...|:   :.|..:||          :.|:|.  :|.::|..:..:|                |.
  Rat   661 VALGIGLFMRRRHIVR----------KRTLRRLLQERELVEPLTPSG----------------EA 699

  Fly  1020 PPFASIQELIMHQYHSELPVTVKSGAILRRPVCRERWELSNDDVVLLERIGRGNFGDVYKA---- 1080
            |          :|.|..:                    |...:...::.:|.|.||.|||.    
  Rat   700 P----------NQAHLRI--------------------LKETEFKKIKVLGSGAFGTVYKGLWIP 734

  Fly  1081 KLKSTKLDVAVKTCRMTLPDEQKRKFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGS 1145
            :.:..|:.||:|..|.....:..::.|.|..::...|:|::.:|:|||: ...:.::.:|:..|.
  Rat   735 EGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPYGC 798

  Fly  1146 LLTYLRKNSNGLTTRQQMGMCRDAAAGMRYLESKNCIHRDLAARNCLVDLEHSVKISDFGMSR-- 1208
            ||.|:|::.:.:.::..:..|...|.||.|||.:..:||||||||.||.....|||:|||:::  
  Rat   799 LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 863

  Fly  1209 --EEEEYIVSDGMKQIPVKWTAPEALNFGKYTSLCDVWSYGILMWEIFSKGDTPYSGMTNSRARE 1271
              ||:||....|  ::|:||.|.|::....||...||||||:.:||:.:.|..||.|:..|....
  Rat   864 GAEEKEYHAEGG--KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 926

  Fly  1272 RIDTGYRMPTPKSTPEEMYRLMLQCWAADAESRPHFDEI 1310
            .::.|.|:|.|.....::|.:|::||..||:|||.|.|:
  Rat   927 ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 965

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341 17/58 (29%)
SH2_Fps_family 953..1039 CDD:198224 14/90 (16%)
TyrKc 1063..1311 CDD:197581 89/256 (35%)
PTKc_Fes_like 1067..1315 CDD:270637 89/252 (35%)
EgfrNP_113695.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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