DRSC/TRiP Functional Genomics Resources

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Protein Alignment FER and old-2

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_496123.1 Gene:old-2 / 191738 WormBaseID:WBGene00003863 Length:498 Species:Caenorhabditis elegans


Alignment Length:360 Identity:104/360 - (28%)
Similarity:164/360 - (45%) Gaps:92/360 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1009 TTGEGNF--------RFEGPP---FASIQELIMH-QYHSELPVTVKSGAILRRPVCRERWELSND 1061
            |:||.:|        ..|.||   .|.|.:.|.: .|::|:                   |::.:
 Worm   122 TSGEDDFGKTPSRLSNEECPPELKLAPINDRIKYLHYYAEV-------------------EINEE 167

  Fly  1062 DVVLLE--RIGRGNFGDVYKAKLKS---------TKLDVAVKTCRMTLPDEQKRKFLQEGRILKQ 1115
            |:.:.:  .:|.|.||.:.|..|:|         ::|:||||:     |       |.|...::|
 Worm   168 DLDISKGRPLGSGEFGIIRKGFLRSKNSKNKETESRLEVAVKS-----P-------LNEYNHIQQ 220

  Fly  1116 ---YD----------HPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSNGLTTRQ------ 1161
               ||          ||||:.|:|.....:..||:.|||..|.||::||||....|..|      
 Worm   221 ELIYDELKVMCAVGKHPNILALVGGITIGEKRMIISELVENGDLLSFLRKNRRNFTIDQLAFEPE 285

  Fly  1162 --QMGM------CRDAAAGMRYLESKNCIHRDLAARNCLVDLEHSVKISDFGMSR--EEEEYIVS 1216
              .:|:      ....|.||.||....|:|||||.||.|:.....::|:|||::|  :.::|..:
 Worm   286 KPSLGLVDLVSFAFQIAKGMEYLIHVPCVHRDLALRNVLIKGNMVIRIADFGLARRHKNKDYYKT 350

  Fly  1217 DGM-KQIPVKWTAPEALNFGKYTSLCDVWSYGILMWEIFSKGDTPYSGMTNSRARER-------- 1272
            ..: ..:|:.|.|||:::...:|...||||||:.::|:||.|.:||..:.....|:.        
 Worm   351 QSVDTPLPIHWMAPESIDKLLFTQKSDVWSYGVCLYELFSLGKSPYKNVIKYDERDSYCKYVLAY 415

  Fly  1273 IDTGYRMPTPKSTPEEMYRLMLQCWAADAESRPHF 1307
            ::.|.|:..|.....|:|.:|..||..|..||..|
 Worm   416 LNEGKRLAQPAHADAEIYNVMKLCWDLDMNSRTTF 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 12/41 (29%)
TyrKc 1063..1311 CDD:197581 90/294 (31%)
PTKc_Fes_like 1067..1315 CDD:270637 90/290 (31%)
old-2NP_496123.1 PTKc 175..458 CDD:270623 90/288 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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