DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and gcy-13

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_506097.3 Gene:gcy-13 / 191646 WormBaseID:WBGene00001539 Length:1028 Species:Caenorhabditis elegans


Alignment Length:358 Identity:81/358 - (22%)
Similarity:136/358 - (37%) Gaps:79/358 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   980 FLVRETIRNEESQIVLSVCWNGHKHFIVQTTGEGNFRFEGPPFASIQELI---MHQYHSELPV-- 1039
            |||.:..|:||.::        ...:||             |...:|.:|   ...:||...:  
 Worm   458 FLVIKARRDEELRL--------DDQWIV-------------PHGMLQSIIKGRKESHHSSRSLQS 501

  Fly  1040 --TVKSGAILRRPVCRERWELSNDDVVLLERIGRGNFGDVYKAKLKSTKLDVAVKTCRMTLP-DE 1101
              |..:|..          .:|:..|...|...:|.|  ||..:      .|..:..::.:| .:
 Worm   502 NSTTTTGTT----------GISSRSVFFPETETQGYF--VYMNE------PVLARKYQLRVPIFK 548

  Fly  1102 QKRKFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSNGLTTRQQMGMC 1166
            |.|   .|.|:|:..:|.|:.:.||:.:.....|........||:...:.|:|..:.......:.
 Worm   549 QDR---SELRMLRSIEHDNVNRFIGLSIDGPVYMSFWRYCSRGSIKDVIAKSSINMDGFFIYCLI 610

  Fly  1167 RDAAAGMRYL-ESKNCIHRDLAARNCLVDLEHSVKISDFGMS-REEEEYIVSDGMKQIPVKWTAP 1229
            :|.|:|::|: .|....|..|.:..|.::....|||..:|:| .:..|....||:..     |||
 Worm   611 KDIASGLQYIHHSPIKQHGSLTSECCYINDRWQVKIGSYGLSFMQGVEKRTEDGLLH-----TAP 670

  Fly  1230 EALNFG--KYTSLCDVWSYGILMWEIFSKGDTPYSGMTNSRARER--------IDTGYRMPTPKS 1284
            |.|..|  ..|...||:|:.|:..|:..     :|...|...|:.        :..|.|.|...|
 Worm   671 EVLREGLTSGTQAGDVYSFSIVCSELVG-----HSSAWNLENRKEEADEIIFMVKRGGRTPFRPS 730

  Fly  1285 TPE-------EMYRLMLQCWAADAESRPHFDEI 1310
            ..:       .|..|:..||..|.:.||:.|.:
 Worm   731 LDDVDDDINPAMLHLIRDCWDEDPKQRPNIDMV 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 13/61 (21%)
TyrKc 1063..1311 CDD:197581 65/268 (24%)
PTKc_Fes_like 1067..1315 CDD:270637 64/264 (24%)
gcy-13NP_506097.3 PBP1_NPR_GC_like 3..397 CDD:107347
ANF_receptor 13..368 CDD:279440
PKc_like 548..770 CDD:304357 57/229 (25%)
HNOBA <797..829 CDD:285003
CYCc 808..1000 CDD:214485
Guanylate_cyc 835..1022 CDD:278633
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100013
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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