DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and frk-1

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_001369901.1 Gene:frk-1 / 191635 WormBaseID:WBGene00001487 Length:390 Species:Caenorhabditis elegans


Alignment Length:419 Identity:145/419 - (34%)
Similarity:236/419 - (56%) Gaps:54/419 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   906 GELDENSDRDIDNDEEEEDSASDDVLSMKDHCYCVPSLAASISLSTNRPLYEEEWFHGVLPREEV 970
            |.::::|:.|.        |.:||:.|                         .|::||::||::.
 Worm     2 GTVEKSSNNDA--------SVTDDIRS-------------------------AEYYHGMVPRQDA 33

  Fly   971 VRLLNNDGDFLVRETIRNEESQIVLS--------VCWNGHKHFIVQTTGEGN-FRFEGP-PFASI 1025
            ...|..:||||||:| .....::||:        :|    :||::......| |.||.. ..::|
 Worm    34 EGFLKREGDFLVRKT-EQMPGKVVLAMSVRVTDELC----RHFMLNMDPTSNKFYFEHTHQESTI 93

  Fly  1026 QELIMHQYHSELPVTVKSGAILRRPVCRERWELSNDDVVLLERIGRGNFGDVYKAKL-KSTKLDV 1089
            .|||.....::.|::..|||.:|||:.|..|.:::|.:|..:::|.|.||||:.|:| :..|.:|
 Worm    94 SELINWHMTTKTPISAASGAKIRRPMERSPWLINHDSIVANKKLGEGAFGDVFIAELDQGGKQEV 158

  Fly  1090 AVKTCRMTLPDEQKRKFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNS 1154
            ||||.|.....|.:.:|::|.|::::|.|.::|||||:.:.:.|:|||||....||||::|:||.
 Worm   159 AVKTMRAEATREARLRFMKEARLMRKYQHKHVVKLIGVAIHEHPLMIVMEYCPNGSLLSHLKKNK 223

  Fly  1155 NGLTTRQQMGMCRDAAAGMRYLESKNCIHRDLAARNCLVDLEHSVKISDFGMSREEEEYIVSDGM 1219
            ..|.  :::....:||.|:.|||...|||||:||||||:..::.:||||||||..::| |..:.:
 Worm   224 VSLI--EKLRFTTEAADGIAYLERSKCIHRDIAARNCLLSAKNELKISDFGMSDNKDE-IKDETL 285

  Fly  1220 KQIPVKWTAPEALNFGKYTSLCDVWSYGILMWEIFSKGDTPYSGMTNSRARERIDTG-YRMPTPK 1283
            :::|:||.|||.:....||...|:|::|:|:|||:|.|..||.|:|..:.|.:|... |||..|.
 Worm   286 EKVPIKWLAPETMQEKVYTHKTDIWTFGVLVWEIYSDGAEPYPGLTKIQTRAKIVVNDYRMKMPD 350

  Fly  1284 STPEEMYRLML-QCWAADAESRPHFDEIY 1311
            .|...:..::. .||..:.|.|...|.|:
 Worm   351 GTHPTVADVVTGTCWQKNPEKRSTMDSIH 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 26/95 (27%)
TyrKc 1063..1311 CDD:197581 101/250 (40%)
PTKc_Fes_like 1067..1315 CDD:270637 101/248 (41%)
frk-1NP_001369901.1 SH2_Fps_family 16..107 CDD:198224 29/120 (24%)
TyrKc 131..382 CDD:197581 102/252 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H74300
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D255116at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 1 1.000 - - otm14377
orthoMCL 1 0.900 - - OOG6_100013
Panther 1 1.100 - - O PTHR24418
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3894
SonicParanoid 1 1.000 - - X1749
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.950

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