DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and R11E3.1

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_500644.2 Gene:R11E3.1 / 187810 WormBaseID:WBGene00020003 Length:549 Species:Caenorhabditis elegans


Alignment Length:485 Identity:149/485 - (30%)
Similarity:248/485 - (51%) Gaps:73/485 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   902 ESSSGEL-----------DENSDR--DIDNDEEEEDSASDDV--LSMKDHCYCVPSLAASISLST 951
            :|..||:           ||..:|  |:....||:.|...|.  ...||..      |.|.|:..
 Worm     3 DSEVGEIIKKKSIRETTTDETQERRPDLTTASEEKGSEKKDEKGSDRKDES------ATSKSVYV 61

  Fly   952 NRPLYEEE----------WFHGVLPREEVVRLLNNDGDFLVRE---TIRNE-----ESQIVLSVC 998
            .:.:.|:|          ::||.|||:::..::.|:||:|:|.   |.:.|     :..|:||||
 Worm    62 EKDVVEDEELYKSLQAMPFYHGFLPRDDLGVIIRNEGDYLIRVSEITTKKEGTTGIKRDIILSVC 126

  Fly   999 WNGHKHFIVQTTG------------------------EGNFRFEGPPFASIQELIMHQYHSELPV 1039
            .:.......:.|.                        :|.|..:|..|.:|:.|:.: ||....:
 Worm   127 SSERGGTETEQTNTKSDAKSELNLGERKMRNMVIRRFDGKFGIKGNLFPTIEALLAN-YHVTNAL 190

  Fly  1040 TVKSGAILRRPVCRERWELSNDDVVLLERIGRGNFGDVYKAKL--KSTKLDVAVKTCRMTLPDEQ 1102
            ..|....|:.|:..:.||..:..|.|.:::|.|.:|:|.|..|  |:.|||||||..:....::.
 Worm   191 ETKENRFLKTPIDLQVWENRHSAVKLGDKLGEGAYGEVRKGVLHRKNKKLDVAVKLMKGGELNKM 255

  Fly  1103 K-RKFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSNGLTTRQQMGMC 1166
            | |:.:.|.|:::.:.|.|||:..|:.|.:||:.|::|||.||:|.|||:||.  ::..:.|.||
 Worm   256 KIREMMNEARLMRNFKHKNIVRFFGVAVVEQPLYILLELVNGGALNTYLQKNK--VSDLELMRMC 318

  Fly  1167 RDAAAGMRYLESKNCIHRDLAARNCLVDLEHSVKISDFGMSREEEEYIVSDGMKQIPVKWTAPEA 1231
            ..||.|::||.:.:|||||:||||||...:..||:||||:|....:|.:....| :|:||.|||.
 Worm   319 LGAAQGLQYLHANHCIHRDIAARNCLYSNDKVVKLSDFGLSVVGNQYKLCAAQK-LPIKWLAPET 382

  Fly  1232 LNFGKYTSLCDVWSYGILMWEIFSKGDTPYSGMTNSRARERIDTGYRMPTPKSTPEEMYRLML-- 1294
            :....:|...||:|||::.:||||.|..|:.|:||:..:..:..|..:..|:|.||: :|..:  
 Worm   383 ITTRFFTPKTDVYSYGVMCFEIFSNGAEPWEGVTNTVTKNNVVNGINLVIPESCPEK-FRSFVHE 446

  Fly  1295 QCWAADAESRPHFDEIYNVVDALILRLDNS 1324
            :.:..|.:.|...|::...::.:|..:.|:
 Worm   447 KIFVVDPKRRVVMDDVSRFIEPIINDMHNA 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 28/127 (22%)
TyrKc 1063..1311 CDD:197581 98/252 (39%)
PTKc_Fes_like 1067..1315 CDD:270637 96/252 (38%)
R11E3.1NP_500644.2 SH2_Fps_family 73..191 CDD:198224 26/118 (22%)
STYKc 214..466 CDD:214568 98/255 (38%)
PTKc 218..467 CDD:270623 96/252 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100013
Panther 1 1.100 - - O PTHR24418
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.810

Return to query results.
Submit another query.