DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and Pik3r3

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_006502922.1 Gene:Pik3r3 / 18710 MGIID:109277 Length:487 Species:Mus musculus


Alignment Length:514 Identity:104/514 - (20%)
Similarity:171/514 - (33%) Gaps:164/514 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   863 EVEQPAGSAADEQFCNCPPAGQKPVKPSVQISGHKDHPFESSSGELDENSDRDIDNDEEEEDSAS 927
            |::.||          .||...||:.|:| .:|.|                              
Mouse    31 EMDPPA----------LPPKPPKPMTPAV-TNGMK------------------------------ 54

  Fly   928 DDVLSMKDHCYCVPSLAASISLSTNRPLYEEEWFHGVLPREEVVRLLNN--DGDFLVRETIRNEE 990
            |..:|::|                      .||:.|.:.||||...|.:  ||.||||:.....:
Mouse    55 DSFISLQD----------------------AEWYWGDISREEVNDKLRDMPDGTFLVRDASTKMQ 97

  Fly   991 SQIVLSVCWNGHKHFIVQTTGEGNFRFEGP-PFASIQELIMHQYHSEL-PVTVKSGAILRRPVCR 1053
            ....|::...|:...|.....:|.:.|..| .|.|:.|||.|.:|..| ....|....|..||.|
Mouse    98 GDYTLTLRKGGNNKLIKIYHRDGKYGFSEPLTFTSVVELINHYHHESLAQYNPKLDVKLTYPVSR 162

  Fly  1054 -ERWELSNDDVVLLERIGRG--NFGDVYKAKLKS----------TKLDVAVKTCRMTLPDEQKRK 1105
             ::.:|..:|.:  :.:|:.  .|...|:.|.|.          |..::.:|...:...:|..:.
Mouse   163 FQQDQLVKEDNI--DAVGKNLQEFHSQYQEKSKEYDRLYEEYTRTSQEIQMKRTAIEAFNETIKI 225

  Fly  1106 FLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSNGLTTRQQMGMCRDA- 1169
            |.::....:|:....|.:......:|:...|:|              |.:.|.:|  :|...|: 
Mouse   226 FEEQCHTQEQHSKDYIERFRREGNEKEIERIMM--------------NYDKLKSR--LGEIHDSK 274

  Fly  1170 ----------AAGMRYLESK-NCIHRDLAARNCLVDLEHSVKISDFGMSR-------------EE 1210
                      |...|.::.| |.|..||.....:.| :|.|.::..|:.:             .:
Mouse   275 LRLEQDLKKQALDNREIDKKMNSIKPDLIQLRKIRD-QHLVWLNHRGVRQRRLNAWLGIKNEDSD 338

  Fly  1211 EEYIVSDGMKQIP-----------VKWTAPEALNFGKYTSLCDVWSYGILMWEIFSKGDTPYSGM 1264
            |.|.:::..:.:|           :.....|.|.:||...       ..|:.|...||....|.:
Mouse   339 ESYFINEEDENLPHYDEKTWFVEDINRVQAEDLLYGKPDG-------AFLIRESSKKGCYACSVV 396

  Fly  1265 TNSRARERIDTGYRM-----------------PTPKSTPEEMYRL-----MLQCWAADA 1301
            ..|.|...:..|.|:                 |.|...|....||     .|.|...||
Mouse   397 RGSEALCHLQHGSRIWLCRTLQPVQLTEGAGAPLPADIPGSAQRLPQRQARLPCPCTDA 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 28/89 (31%)
TyrKc 1063..1311 CDD:197581 55/309 (18%)
PTKc_Fes_like 1067..1315 CDD:270637 55/305 (18%)
Pik3r3XP_006502922.1 SH2_nSH2_p85_like 59..167 CDD:198195 35/129 (27%)
iSH2_PI3K_IA_R 172..332 CDD:355389 31/178 (17%)
SH2 351..>396 CDD:387587 10/51 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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