DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and Ddr2

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_036018652.1 Gene:Ddr2 / 18214 MGIID:1345277 Length:864 Species:Mus musculus


Alignment Length:462 Identity:125/462 - (27%)
Similarity:199/462 - (43%) Gaps:114/462 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   900 PFESSSGELDENSDRDIDNDEEEEDSASDDVLSMKDHCYCVPSLAASISLSTNRPLYEEEWFHGV 964
            |.|||.    .|::|.....|:|.:|..|.:..:                   ||.|:|.     
Mouse   458 PSESSM----FNNNRSSSPSEQESNSTYDRIFPL-------------------RPDYQEP----- 494

  Fly   965 LPREEVVRLLNNDGDFLVRETIRNEE---SQIVLSVCWNGHKHFIVQTTGEGNFRFEGPPFASIQ 1026
                  .||:....:|...|    ||   |.:|.....||.               ||.|     
Mouse   495 ------SRLIRKLPEFAPGE----EESGCSGVVKPAQPNGP---------------EGVP----- 529

  Fly  1027 ELIMHQYHSELPVTVKSGAILRRPVCRERWE---LSNDDVVL----------LERIGRGNFGDVY 1078
                  :::|..:....|.......|.....   ||..||.:          .|::|.|.||:|:
Mouse   530 ------HYAEADIVNLQGVTGGNTYCVPAVTMDLLSGKDVAVEEFPRKLLAFKEKLGEGQFGEVH 588

  Fly  1079 --------KAKLKSTKLD--------VAVKTCRMTLPDEQKRKFLQEGRILKQYDHPNIVKLIGI 1127
                    |.|.|...||        ||||..|.......:..||:|.:|:.:...|||::|:.:
Mouse   589 LCEVEGMEKFKDKDFALDVSANQPVLVAVKMLRADANKNARNDFLKEIKIMSRLKDPNIIRLLAV 653

  Fly  1128 CVQKQPIMIVMELVLGGSLLTYLRK-------NSNGLTTRQQMG-MCRDAAAGMRYLESKNCIHR 1184
            |:.:.|:.::.|.:..|.|..:|.:       :|:...:...:. |....|:||:||.|.|.:||
Mouse   654 CITEDPLCMITEYMENGDLNQFLSRHEPLSSCSSDATVSYANLKFMATQIASGMKYLSSLNFVHR 718

  Fly  1185 DLAARNCLVDLEHSVKISDFGMSRE--EEEYIVSDGMKQIPVKWTAPEALNFGKYTSLCDVWSYG 1247
            |||.|||||...:::||:||||||.  ..:|....|...:|::|.:.|::..||:|:..|||::|
Mouse   719 DLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFG 783

  Fly  1248 ILMWEIFS-KGDTPYSGMTNSRARERIDTGYR-------MPTPKSTPEEMYRLMLQCWAADAESR 1304
            :.:||.|: ..:.|||.:::.:..|.....:|       :|.|...|:.:|:|||.||..:.:.|
Mouse   784 VTLWETFTFCQEQPYSQLSDEQVIENTGEFFRDQGRQIYLPQPALCPDSVYKLMLSCWRRETKHR 848

  Fly  1305 PHFDEIY 1311
            |.|.||:
Mouse   849 PSFQEIH 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 18/88 (20%)
TyrKc 1063..1311 CDD:197581 91/291 (31%)
PTKc_Fes_like 1067..1315 CDD:270637 91/279 (33%)
Ddr2XP_036018652.1 FA58C 42..194 CDD:238014
PKc_like 567..860 CDD:419665 91/289 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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