DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and mlk-1

DIOPT Version :10

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_001300151.1 Gene:mlk-1 / 178895 WormBaseID:WBGene00003374 Length:1059 Species:Caenorhabditis elegans


Alignment Length:440 Identity:106/440 - (24%)
Similarity:176/440 - (40%) Gaps:123/440 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   922 EEDSASDDVLSMKDHCYCVPSLAASISLSTNRPLYEEEWFHGVLPREEVVRLLNNDGDFLVRETI 986
            |.::..||.|::.     :.::...:::.||    |:.|:.|.|                     
 Worm    79 EYEAQKDDELNLP-----LGAIITLVTVETN----EDGWYRGEL--------------------- 113

  Fly   987 RNEESQIVLSVCWNGH-----KHFIVQTTGEGNF-RFEGPPFASIQELIMHQYHSELPVTVKS-- 1043
                         ||.     .::..:.|.:.|. .|:       |:.||      |||.|::  
 Worm   114 -------------NGKVGLFPSNYAREVTYKDNLVEFK-------QDEIM------LPVAVRTLS 152

  Fly  1044 ------GA---ILRRPVCRERWELSNDDVVLLERIGRGNFGDVYKAKLKSTKLDVAVKTCRMTLP 1099
                  ||   :.:..: :.:.||.|.      |:|.. .||..||.||......:.....:...
 Worm   153 DCQIGHGATATVFKMDI-KIKKELQNG------RMGEA-VGDQMKAALKRFNRHASNFRADVVST 209

  Fly  1100 DEQKRKFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRK-NSNGLTTRQQM 1163
            |||..:..:|..::....|.|||:|:|||::.....:::||..|.||....|. ||:...   .:
 Worm   210 DEQLEQLKREANLVNGLSHNNIVRLLGICLEDPYFGLLLELCEGSSLRNVCRNLNSDAAI---PL 271

  Fly  1164 GMCRD----AAAGMRYLESKNCIHRDLAARNCLVDLE-------------------------HSV 1199
            |:..|    .|.||.||..:..:||||.|.|.||..|                         ..:
 Worm   272 GVLIDWATQVAEGMEYLTKQGYVHRDLKADNVLVKEEVCLCMDEEMFQYAYCLKCGKRPFDKLQL 336

  Fly  1200 KISDFGMSREEEEYIVSDGMKQIPV---KWTAPEALNFGKYTSLCDVWSYGILMWEIFSKGDTPY 1261
            ||:|||::|:    :.:|..:....   .|.||||...|.::...||||||:::||:.:: :.||
 Worm   337 KITDFGVTRK----MTADANRFSTAGTYAWLAPEAFKEGTWSEASDVWSYGVVLWELLTR-EEPY 396

  Fly  1262 SG-MTNSRARERIDTGYRMPTPKSTPEEMYRLMLQCWAADAESRPHFDEI 1310
            .| :..:.|.:..:.|..:....|.|:...:||..||..:...||.|..:
 Worm   397 QGHIPATIAFQIANKGQNLSIGDSCPDRWKKLMQDCWNLEPNFRPKFSTL 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 13/91 (14%)
PTKc_Fes_like 1067..1315 CDD:270637 79/278 (28%)
mlk-1NP_001300151.1 SH3 75..124 CDD:473055 12/87 (14%)
Protein Kinases, catalytic domain 156..446 CDD:473864 84/305 (28%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.