DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and mlk-1

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_001300151.1 Gene:mlk-1 / 178895 WormBaseID:WBGene00003374 Length:1059 Species:Caenorhabditis elegans


Alignment Length:440 Identity:106/440 - (24%)
Similarity:176/440 - (40%) Gaps:123/440 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   922 EEDSASDDVLSMKDHCYCVPSLAASISLSTNRPLYEEEWFHGVLPREEVVRLLNNDGDFLVRETI 986
            |.::..||.|::.     :.::...:::.||    |:.|:.|.|                     
 Worm    79 EYEAQKDDELNLP-----LGAIITLVTVETN----EDGWYRGEL--------------------- 113

  Fly   987 RNEESQIVLSVCWNGH-----KHFIVQTTGEGNF-RFEGPPFASIQELIMHQYHSELPVTVKS-- 1043
                         ||.     .::..:.|.:.|. .|:       |:.||      |||.|::  
 Worm   114 -------------NGKVGLFPSNYAREVTYKDNLVEFK-------QDEIM------LPVAVRTLS 152

  Fly  1044 ------GA---ILRRPVCRERWELSNDDVVLLERIGRGNFGDVYKAKLKSTKLDVAVKTCRMTLP 1099
                  ||   :.:..: :.:.||.|.      |:|.. .||..||.||......:.....:...
 Worm   153 DCQIGHGATATVFKMDI-KIKKELQNG------RMGEA-VGDQMKAALKRFNRHASNFRADVVST 209

  Fly  1100 DEQKRKFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRK-NSNGLTTRQQM 1163
            |||..:..:|..::....|.|||:|:|||::.....:::||..|.||....|. ||:...   .:
 Worm   210 DEQLEQLKREANLVNGLSHNNIVRLLGICLEDPYFGLLLELCEGSSLRNVCRNLNSDAAI---PL 271

  Fly  1164 GMCRD----AAAGMRYLESKNCIHRDLAARNCLVDLE-------------------------HSV 1199
            |:..|    .|.||.||..:..:||||.|.|.||..|                         ..:
 Worm   272 GVLIDWATQVAEGMEYLTKQGYVHRDLKADNVLVKEEVCLCMDEEMFQYAYCLKCGKRPFDKLQL 336

  Fly  1200 KISDFGMSREEEEYIVSDGMKQIPV---KWTAPEALNFGKYTSLCDVWSYGILMWEIFSKGDTPY 1261
            ||:|||::|:    :.:|..:....   .|.||||...|.::...||||||:::||:.:: :.||
 Worm   337 KITDFGVTRK----MTADANRFSTAGTYAWLAPEAFKEGTWSEASDVWSYGVVLWELLTR-EEPY 396

  Fly  1262 SG-MTNSRARERIDTGYRMPTPKSTPEEMYRLMLQCWAADAESRPHFDEI 1310
            .| :..:.|.:..:.|..:....|.|:...:||..||..:...||.|..:
 Worm   397 QGHIPATIAFQIANKGQNLSIGDSCPDRWKKLMQDCWNLEPNFRPKFSTL 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 13/91 (14%)
TyrKc 1063..1311 CDD:197581 79/282 (28%)
PTKc_Fes_like 1067..1315 CDD:270637 79/278 (28%)
mlk-1NP_001300151.1 SH3 75..124 CDD:302595 12/87 (14%)
STYKc 153..450 CDD:214568 84/310 (27%)
PKc_like 156..446 CDD:304357 84/305 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100013
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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