DRSC/TRiP Functional Genomics Resources

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Protein Alignment FER and Y116A8C.24

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_001255917.1 Gene:Y116A8C.24 / 178481 WormBaseID:WBGene00013801 Length:528 Species:Caenorhabditis elegans


Alignment Length:472 Identity:129/472 - (27%)
Similarity:227/472 - (48%) Gaps:59/472 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   888 KPS-VQISGHKDHPFESSSGELDENSDRDIDNDEEEEDSASD-DVLSMKDHCYCVPSLAASISLS 950
            ||| .|..|  |....:...:...|..||.....:.|..|:. |....|...     ....|.|.
 Worm     3 KPSKCQSPG--DSSISAKENDAQSNRSRDSKVAPKSEGLATGLDETEWKSRL-----TTPEIVLK 60

  Fly   951 TNRPLYEEEWFHGVLPREEVVRLLNNDGDFLVRET-IRNEESQIVLSVCWNG---HKHFIVQTTG 1011
            ..|.|....::||::.|:.|...|...||:|:|.| .|..|.:.:||. :|.   |.|..::...
 Worm    61 EIRTLEGVSYYHGMVARDLVESKLTRCGDYLIRATDNRIMEFEFILSF-FNKKRIHSHLTIKCDV 124

  Fly  1012 E-GNFRFEGPPFASIQELIMHQYHSELPVT-------VKSGAILRRPVCRERWELSNDDVVLLER 1068
            | |.:        ::..|.::|:.|.:.:|       :.:|..|:|.:.:.::.:::|.:....:
 Worm   125 EAGKW--------ALGLLSVNQFSSVVDLTNFYKTNPIGAGFFLKRAISKGKYMIAHDRIKYSPK 181

  Fly  1069 ---IGRGNFGDVYKAK--LKSTKLDVAVKTCRMTLPDEQ-----------KRKFLQEGRILKQYD 1117
               :|.|||.||::.|  |::..::||:||.:: |.|..           |::.:||..::.|..
 Worm   182 DDLLGTGNFSDVFRGKIELENQMVNVALKTTKL-LDDTMDPTKNVKANKIKKEMIQEAEVMSQLR 245

  Fly  1118 HPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSNGLTTRQQMGMCRDAAAGMRYLESKNCI 1182
            |.|:....||.|.:.||::::|...||:|..:|.|..:.:.|.::.....||:||:.|:.:.:..
 Worm   246 HANVTSFFGIAVDRLPILLIIEFCNGGNLQGHLIKFGDRIGTNERFLYLHDASAGLNYIHAMSIT 310

  Fly  1183 HRDLAARNCLVDLEHSVKISDFGMS----REEEEYIVS---DGMK----QIPVKWTAPEALNF-G 1235
            |||:||||||:.:...||:|||||.    |.|....|:   ||.:    ::||:|.:||.::. .
 Worm   311 HRDIAARNCLISVNGFVKLSDFGMGLKVRRNESAKKVAEDDDGKENKEPKLPVRWMSPELVDTPD 375

  Fly  1236 KYTSLCDVWSYGILMWEIFSKGDTPYSGMTNSRARERIDTGYRMPTPKSTPEEMYRLMLQCWAAD 1300
            .::.:.|:||.|||.:|||:....|:..:.::...:.:.:|...|.|.|...::.||:.....|.
 Worm   376 AFSKMSDMWSLGILAYEIFTNATKPFFNLDDTDVMQTVKSGKHPPLPLSMGPDLIRLLKDVLVAA 440

  Fly  1301 AESRPHFDEIYNVVDAL 1317
            ...|...|:.||.:..|
 Worm   441 PTQRTTADKFYNELHVL 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 24/90 (27%)
TyrKc 1063..1311 CDD:197581 82/275 (30%)
PTKc_Fes_like 1067..1315 CDD:270637 84/275 (31%)
Y116A8C.24NP_001255917.1 SH2 70..155 CDD:214585 23/93 (25%)
TyrKc 181..446 CDD:197581 81/265 (31%)
PTKc 183..454 CDD:270623 84/271 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167370
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24418
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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