DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and kin-24

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_501761.2 Gene:kin-24 / 177829 WormBaseID:WBGene00002206 Length:516 Species:Caenorhabditis elegans


Alignment Length:408 Identity:113/408 - (27%)
Similarity:203/408 - (49%) Gaps:48/408 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   952 NRPLYEEEWFHGVLPREEVVRLLNND--GDFLVRETIRNEESQIVLSVCW-----------NGHK 1003
            |..::..:.:|||..:|||..|:..:  |.||.|...  .:|.:.|::..           |.|.
 Worm    21 NSRVHNLKCYHGVQKKEEVANLMRGERPGTFLFRSCF--VKSGVALALFLSVKVRAGDSDANIHH 83

  Fly  1004 HFIVQTTGEGNF-----------RFEGPPFASIQELIMHQYHSELPVTVKSGAILRRPVCRERWE 1057
            :.:....||...           ..|...|.:::|||.|..|..|...::.|    ||:.|..|:
 Worm    84 YQVEDRAGEYYLMQELMEKEELVTRESKAFPTLEELIGHFQHHRLACKIRLG----RPLKRPSWQ 144

  Fly  1058 LSNDDVVLLE--RIGRGNFGDVYKAKLKSTK--LDVAVKTCRMTLPD-----EQKRKFLQEGRIL 1113
            |.::.||..:  ::|.|||..||:..|:...  :.||:|..:.:..:     |.:...|.|.||:
 Worm   145 LRHNSVVYDDTGKLGSGNFCIVYRGMLRKQGKIIPVAIKVSKNSDKESAALMETRNLLLAEARIM 209

  Fly  1114 KQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSNGLTTRQQMGMCRDAAAGMRYLES 1178
            ..|::.|::::.|:.....|.|:.||...||||...|:|....:...::..:..|||.|||||..
 Worm   210 MNYNNINVIRIYGVACDVPPFMVCMEFCSGGSLEDALKKYGKDMEEFERQILLIDAARGMRYLHD 274

  Fly  1179 KNCIHRDLAARNCLVDLEHSVKISDFGMSR--EEEEYIVSDGMKQIPVKWTAPEAL-NFGKYTSL 1240
            |.|:|||||:||||:..:..|||:|||:|:  |:::....:.:|:.|:.|.|||.: ...::::.
 Worm   275 KKCVHRDLASRNCLISFDGIVKIADFGLSKTLEKDQKAFKEALKEAPLAWLAPECIQRESEFSTK 339

  Fly  1241 CDVWSYGILMWEIFSKGDTPYSGMTNSRARERIDTGYRMPTPKSTPE--EMYRLMLQCWAADAES 1303
            .|||::|::::|:::..:..::|..:.....:|... .|||.::..:  .|..::...|....:.
 Worm   340 TDVWAFGVVIFEVYNNAEKLFAGEEDIAILRKIKKA-NMPTIENRTKVPAMQAVLSSIWTRKPDD 403

  Fly  1304 RPHFDEIYNVVDALILRL 1321
            ||   |:..|::.|:..|
 Worm   404 RP---EMQKVLEKLVAAL 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 25/109 (23%)
TyrKc 1063..1311 CDD:197581 78/261 (30%)
PTKc_Fes_like 1067..1315 CDD:270637 77/261 (30%)
kin-24NP_501761.2 SH2 29..128 CDD:214585 24/100 (24%)
PTKc 157..414 CDD:270623 77/260 (30%)
STYKc 157..414 CDD:214568 77/260 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167368
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0194
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24418
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.800

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