DRSC/TRiP Functional Genomics Resources

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Protein Alignment FER and src-1

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_001364829.1 Gene:src-1 / 171722 WormBaseID:WBGene00005077 Length:537 Species:Caenorhabditis elegans


Alignment Length:492 Identity:167/492 - (33%)
Similarity:253/492 - (51%) Gaps:95/492 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   902 ESSSGELDENSDRDIDND---------EEEE--------DSASD--------DVLSMKDHCYC-- 939
            |.:..:|:..||..:.|.         :|.|        ||.:|        |.:.:.||..|  
 Worm    48 EGTISQLNGTSDGMMGNGRGGGGGGGAQERETLVALYPYDSRADGDLSFQKGDAMYLLDHSNCDW 112

  Fly   940 -------------VPSLAASISLSTNRPLYEEEWFHGVLPREEVVRLLNND----GDFLVRE--- 984
                         ||    ...::..:.:..|||:.|.:||....||:.:.    |.||:||   
 Worm   113 WYVRHQRTGQTGYVP----RNFVAKQQTIESEEWYAGKIPRNRAERLVLSSHLPKGTFLIREREA 173

  Fly   985 -------TIRNEESQIVLSVCWNGH--KHFIVQTT--GEGNFRFEGPPFASIQELIMHQYHSELP 1038
                   |||:.:.|      .||.  ||:.::..  .:|.|......|.|:|||:  :|:|::|
 Worm   174 DTREFALTIRDTDDQ------RNGGTVKHYKIKRLDHDQGYFITTRRTFRSLQELV--RYYSDVP 230

  Fly  1039 ------VTVKSGAIL-RRP----VCRERWELSNDDVVLLERIGRGNFGDVYKAKLKSTKLDVAVK 1092
                  :|..:..:. .||    ..::.||:..:.:.|..::|.||||:|:..|.:.. ::||:|
 Worm   231 DGLCCQLTFPAPRLAPTRPDLSHDTQQNWEIPRNQLHLKRKLGDGNFGEVWYGKWRGI-VEVAIK 294

  Fly  1093 TCRM-TLPDEQKRKFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSNG 1156
            |.:. |:..|   .||||.:|:||.||||:|||..:|.:::|..|:.|.::.||||.|||.:.:.
 Worm   295 TMKPGTMSPE---AFLQEAQIMKQCDHPNLVKLYAVCTREEPFYIITEYMINGSLLQYLRTDGST 356

  Fly  1157 LTTRQQMGMCRDAAAGMRYLESKNCIHRDLAARNCLVDLEHS----VKISDFGMSR---EEEEYI 1214
            |..:..:.|....|.||.|||.:..:||||||||.||..:.|    ||::|||::|   ||:.|.
 Worm   357 LGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVLVGDKISGVPVVKVADFGLARKLMEEDIYE 421

  Fly  1215 VSDGMKQIPVKWTAPEALNFGKYTSLCDVWSYGILMWEIFSKGDTPYSGMTNSRARERIDTGYRM 1279
            ...|.| .|:|||||||...|.:|...||||||||::||.:||..||.||.|....|:::.||||
 Worm   422 ARTGAK-FPIKWTAPEAATCGNFTVKSDVWSYGILLYEIMTKGQVPYPGMHNREVVEQVELGYRM 485

  Fly  1280 PTPKSTPEEMY-RLMLQCWAADAESRPHFDEIYNVVD 1315
            |.|:..||::| .::|:||....:.||.||.:|:..|
 Worm   486 PMPRGCPEQIYEEVLLKCWDKTPDRRPTFDTLYHFFD 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 31/109 (28%)
TyrKc 1063..1311 CDD:197581 113/256 (44%)
PTKc_Fes_like 1067..1315 CDD:270637 113/256 (44%)
src-1NP_001364829.1 SH3_Src_like 79..130 CDD:212779 9/54 (17%)
SH2_Src_family 138..240 CDD:199827 32/109 (29%)
PTKc_Src_like 270..522 CDD:270630 113/256 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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