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Protein Alignment FER and Limk2

DIOPT Version :9

Sequence 1:	NP_524288.3	Gene:	FER / 41118	FlyBaseID:	FBgn0000723	Length:	1325	Species:	Drosophila melanogaster
Sequence 2:	XP_030101468.1	Gene:	Limk2 / 16886	MGIID:	1197517	Length:	702	Species:	Mus musculus

Alignment Length:	333	Identity:	89/333 - (26%)
Similarity:	153/333 - (45%)	Gaps:	63/333 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly  1038 PVTVKSGAILRRPVCR-ERWELSND---------DVVLLERIGRGNFGDVYKA------KLKSTK 1086
            |.:.|...:|.|.:.| |....|:.         |::..|.:|:|.||...|:      ..|:|.
Mouse   354 PSSPKEPLLLSRDISRSESLRCSSSYSQQIFRPCDLIHGEVLGKGFFGQAIKSWEGGQVTHKATG 418

  Fly  1087 LDVAVKTCRMTLPDEQKRKFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLR 1151
            ..:.:|.. :...:|.::.||.|.::::..||||::|.||:..:.:.:.::.|.:.||:|..:||
Mouse   419 KVMVMKEL-IRCDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLR 482

  Fly  1152 KNSNGLTTRQQMGMCRDAAAGMRYLESKNCIHRDLAARNCLVDLEHSVKISDFGMSREEEEYIVS 1216
             :.:....:|::...:..::||.||.|...|||||.:.|||:.|:.:|.::|||:||     ::.
Mouse   483 -SVDPFPWQQKVRFAKGISSGMAYLHSMCIIHRDLNSHNCLIKLDKTVVVADFGLSR-----LIV 541

  Fly  1217 DGMKQIPVK-------------------------WTAPEALNFGKYTSLCDVWSYGILMWEIFSK 1256
            :..|:.||:                         |.|||.||...|....||:|:||::.||..:
Mouse   542 EERKRPPVEKATTKKRTLRKSDRKKRYTVVGNPYWMAPEMLNGKSYDETVDVFSFGIVLCEIIGQ 606

  Fly  1257 --GDTPYSGMTNSRARERIDTGYRMP------TPKSTPEEMYRLMLQCWAADAESRPHFDEIYNV 1313
              .|......|       :|.|..:.      .|...|...:.|...|...:.||||.|.::.:.
Mouse   607 VYADPDCLPRT-------LDFGLNVKLFWEKFVPTDCPPAFFPLAAICCKLEPESRPAFSKLEDS 664

  Fly  1314 VDALILRL 1321
            .:||.|.|
Mouse   665 FEALSLFL 672

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.