DRSC/TRiP Functional Genomics Resources

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Protein Alignment FER and CSF1R

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_001275634.1 Gene:CSF1R / 1436 HGNCID:2433 Length:972 Species:Homo sapiens


Alignment Length:383 Identity:111/383 - (28%)
Similarity:166/383 - (43%) Gaps:101/383 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1015 FRFEGPPFASIQELIMHQYH---------SELPVTVKSGAILRRPVCRERWELSNDDVVLLERIG 1070
            ::::..|...::..|:..|.         ::||.             .|:||...:::...:.:|
Human   538 YKYKQKPKYQVRWKIIESYEGNSYTFIDPTQLPY-------------NEKWEFPRNNLQFGKTLG 589

  Fly  1071 RGNFGDVYKAKL-----KSTKLDVAVKTCRMTLPDEQKRKFLQEGRILKQY-DHPNIVKLIGICV 1129
            .|.||.|.:|..     :...|.||||..:.|...::|...:.|.:|:... .|.|||.|:|.|.
Human   590 AGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 654

  Fly  1130 QKQPIMIVMELVLGGSLLTYLRK--------------------------------------NSNG 1156
            ...|::::.|....|.||.:||:                                      :|.|
Human   655 HGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLSPGQDPEGGVDYKNIHLEKKYVRRDSGFSSQG 719

  Fly  1157 LTT------------------------------RQQMGMCRDAAAGMRYLESKNCIHRDLAARNC 1191
            :.|                              |..:......|.||.:|.||||||||:||||.
Human   720 VDTYVEMRPVSTSSNDSFSEQDLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNV 784

  Fly  1192 LVDLEHSVKISDFGMSRE---EEEYIVSDGMKQIPVKWTAPEALNFGKYTSLCDVWSYGILMWEI 1253
            |:...|..||.|||::|:   :..|||. |..::||||.|||::....||...||||||||:|||
Human   785 LLTNGHVAKIGDFGLARDIMNDSNYIVK-GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 848

  Fly  1254 FSKGDTPYSG-MTNSRARERIDTGYRMPTPKSTPEEMYRLMLQCWAADAESRPHFDEI 1310
            ||.|..||.| :.||:..:.:..||:|..|...|:.:|.:|..|||.:...||.|.:|
Human   849 FSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 906

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 4/32 (13%)
TyrKc 1063..1311 CDD:197581 103/326 (32%)
PTKc_Fes_like 1067..1315 CDD:270637 103/322 (32%)
CSF1RNP_001275634.1 IG_like 28..85 CDD:214653
ig 207..293 CDD:365836
Ig4_SCFR_like 299..400 CDD:319281
Ig 416..495 CDD:319273
Regulatory juxtamembrane domain 542..574 5/44 (11%)
PTKc_CSF-1R 543..914 CDD:133237 111/378 (29%)
Activation loop 796..818 8/22 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 918..950
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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