DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and Epha7

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_034271.3 Gene:Epha7 / 13841 MGIID:95276 Length:998 Species:Mus musculus


Alignment Length:769 Identity:207/769 - (26%)
Similarity:317/769 - (41%) Gaps:203/769 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   667 LAKDPDSQTKRSSSSSSECRSSKDTSHSKKRSLSFSQKSISNIFSNLKEFSKSP----------L 721
            ||..||:.|....||..|.|.:         .:|.:::...|          ||          |
Mouse   212 LAVFPDTVTGSEFSSLVEVRGT---------CVSSAEEEAEN----------SPRMHCSAEGEWL 257

  Fly   722 VRMGKNHI-LNEEQDAKRTQP--SQHHHSSGSD-----CPTNSSSSSSNNN------------NN 766
            |.:||... ...:|.....:|  .:.:.||..|     |||:|.|....::            ::
Mouse   258 VPIGKCICKAGYQQKGDTCEPCGRRFYKSSSQDLQCSRCPTHSFSDREGSSRCECEDGYYRAPSD 322

  Fly   767 NKNTSSNSNHSASQSTIITSTITTTITTTTTTTPSKENSRLKFKVPKIQKKSKAIRNTFRSKLLN 831
            ....:.....||.|:.|.....|   |.:...:|..:|..               ||....::| 
Mouse   323 PPYVACTRPPSAPQNLIFNINQT---TVSLEWSPPADNGG---------------RNDVTYRIL- 368

  Fly   832 FQLKRSKPCKQCT-KRRRIHPSKSVFDFAKE---------------------FEVEQ-------- 866
                    ||:|: ::....|..|...:..:                     ||||.        
Mouse   369 --------CKRCSWEQGECVPCGSNIGYMPQQTGLEDNYVTVMDLLAHANYTFEVEAVNGVSDLS 425

  Fly   867 -----------PAGSAADEQFCNCPPAGQKPVKPSVQISGHK-DHPFESSSGELDENSDRDIDND 919
                       ..|.||..|....  ..::.::.|||:|..: :||    :|.:.|...:..:.|
Mouse   426 RSQRLFAAVSITTGQAAPSQVSGV--MKERVLQRSVQLSWQEPEHP----NGVITEYEIKYYEKD 484

  Fly   920 EEEE-------DSASDDVLSMKDHCYCVPSLAASISLSTNRPLYEEEWFHGVLPREEVVRLLNND 977
            :.|.       .|.|..:.::|.....|..:.|..:..          :....||.:|..|....
Mouse   485 QRERTYSTLKTKSTSASINNLKPGTVYVFQIRAVTAAG----------YGNYSPRLDVATLEEAS 539

  Fly   978 GDFLVRETIRNEESQI----VLSVCWN------------GHKHF-IVQTTGEG------NFRFEG 1019
            |.......:.:|::.:    |::|...            |.:|. ..:...||      :|:|.|
Mouse   540 GKMFEATAVSSEQNPVIIIAVVAVAGTIILVFMVFGFIIGRRHCGYSKADQEGDEELYFHFKFPG 604

  Fly  1020 ------PPFASIQELIMHQYHSELPVTVKSGAILRRPVCRERWELSNDDVVLLER-IGRGNFGDV 1077
                  |.........:||:..||..:           |           :.:|| ||.|.||:|
Mouse   605 TKTYIDPETYEDPNRAVHQFAKELDAS-----------C-----------IKIERVIGAGEFGEV 647

  Fly  1078 YKAKLK-STKLDVAV--KTCRMTLPDEQKRKFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVME 1139
            ...:|| ..|.||||  ||.::...::|:|.||.|..|:.|:||||:|.|.|:..:.:|:|||:|
Mouse   648 CSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIE 712

  Fly  1140 LVLGGSLLTYLRKNSNGLTTRQQMGMCRDAAAGMRYLESKNCIHRDLAARNCLVDLEHSVKISDF 1204
            .:..|:|..:|||:....|..|.:||.|..|||||||.....:||||||||.||:.....|:|||
Mouse   713 FMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDF 777

  Fly  1205 GMSREEEE-----YIVSDGMKQIPVKWTAPEALNFGKYTSLCDVWSYGILMWEIFSKGDTPYSGM 1264
            |:||..|:     |..:.|  :|||:||||||:.:.|:||..|||||||:|||:.|.|:.||..|
Mouse   778 GLSRVIEDDPEAVYTTTGG--KIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 840

  Fly  1265 TNSRARERIDTGYRMPTPKSTPEEMYRLMLQCWAADAESRPHFDEIYNVVDALI 1318
            :|....:.|:.|||:|.|...|..:::|||.||..|...||.|::|..::|.:|
Mouse   841 SNQDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKDRAERPKFEQIVGILDKMI 894

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 20/114 (18%)
TyrKc 1063..1311 CDD:197581 117/256 (46%)
PTKc_Fes_like 1067..1315 CDD:270637 118/256 (46%)
Epha7NP_034271.3 EphR_LBD_A7 30..206 CDD:198453
FN3 332..438 CDD:238020 20/132 (15%)
FN3 443..534 CDD:238020 19/106 (18%)
EphA2_TM 565..628 CDD:291255 10/62 (16%)
PTKc_EphR_A 628..894 CDD:270651 121/289 (42%)
Pkinase_Tyr 633..890 CDD:285015 118/258 (46%)
SAM_EPH-A7 919..988 CDD:188947
SAM 920..987 CDD:197735
PDZ-binding. /evidence=ECO:0000255 996..998
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.