DRSC/TRiP Functional Genomics Resources

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Protein Alignment FER and trip10b

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_956518.1 Gene:trip10b / 108179043 ZFINID:ZDB-GENE-040426-969 Length:512 Species:Danio rerio


Alignment Length:448 Identity:79/448 - (17%)
Similarity:177/448 - (39%) Gaps:83/448 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGFSSALQSRAAHEALIVRQDAELRLMETMKRSIQMKAKCDKEYAISLTAVAQQGLKIDRADEMQ 65
            |.:.|||..:  |:|:.....:.|.|:|...:.::.:|:.::.|:..|..:.::..:....::..
Zfish     1 MDWGSALWDQ--HDAIERHTQSGLDLLERYMKFVKERAEIEQNYSKQLRNLCKKYTRRGSKEDQD 63

  Fly    66 GSLIS-KSWRSYMDELDHQAKQFKFNAEQLEV-VCDKLTHLSQDKRKARKAYQEEHAKIAARLNH 128
            ..|:| :.::..:.:|:..|.|.:..::.|.| :|.:|:....:.|:.||             ||
Zfish    64 TKLVSQQGFQDVLCQLNDYAGQREQLSDSLTVGICVELSRSLTELRQERK-------------NH 115

  Fly   129 LTDEVVRKKSEYQKHLEGYKALRTRFEENYIKA--PSRSGRKLD--------DVRDKYQKACRKL 183
            |. |:.:.:...:...:..::.:.|||:.:.:|  .::...|::        ||....|.|..::
Zfish   116 LA-EIKKAQQNLESSFKQLESSKRRFEKEWKEAEKANQQTEKVEQDASATKADVDKAKQHANVRI 179

  Fly   184 HLT---HNEYVLSITEAIEVEKDFRNVLLPGLLEHQQSVQESFILLWRNILQEAAQYGDLTADKY 245
            |..   .|||...:.:..:.:.::....:|.:.:..|.::|..:.:   :.....|:.|......
Zfish   180 HFADECKNEYASQLQKYNKEQNNYYYADIPFVYKKLQDLEERCVPM---LADGYVQFSDSEKKIL 241

  Fly   246 KEIQKRIDTVIGS---INPTEEYGEFTEKYKTSPTTPLLFQFDETLIQDIPGKLQSSTLTVDNLT 307
            ..|.|.:|::|.|   |:..::.....|:||:....|...:| |...|.:......:|..:..:.
Zfish   242 PNINKCLDSIISSGRRIDEKQDTLALIEQYKSGAVPPADVEF-EDFSQAVKPAAAENTAHLPKVR 305

  Fly   308 VDWL---RNRLQELEGAVRDCQEKQMKMIEHVNGGSPVANGSIISNGSNTSNGIQSNKDSLCRQS 369
            :..|   :|::                                    ::....:..:::.|.|..
Zfish   306 IKQLFLKKNKV------------------------------------TSPDKPMPCSQEDLSRLP 334

  Fly   370 KDLNALRCQEK----QK--QKLVDMIKCALNEVGCEELPSGCDDDLTLEQNFIENGYN 421
            .|....|.|||    ||  ||.::..:..:...|..|..|...|..:|:....:..:|
Zfish   335 PDQRRRRLQEKVEEVQKELQKELEQSEALMKMKGVYEQNSQLGDPASLQPQITQTAHN 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341 43/250 (17%)
SH2_Fps_family 953..1039 CDD:198224
TyrKc 1063..1311 CDD:197581
PTKc_Fes_like 1067..1315 CDD:270637
trip10bNP_956518.1 F-BAR_CIP4-like 7..255 CDD:153337 47/266 (18%)
HR1_CIP4_FNBP1L 334..414 CDD:212018 15/59 (25%)
SH3_CIP4-like 457..511 CDD:212844
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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