DRSC/TRiP Functional Genomics Resources

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Protein Alignment FER and si:ch73-40a2.1

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_009301289.1 Gene:si:ch73-40a2.1 / 101885322 ZFINID:ZDB-GENE-160728-89 Length:746 Species:Danio rerio


Alignment Length:344 Identity:104/344 - (30%)
Similarity:170/344 - (49%) Gaps:56/344 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1021 PFASIQELIMHQ--YHSELPVT----------------VKSGAILRRPVCRERWELSNDDVVLLE 1067
            |.|.|:|...:.  |....|.|                :|...:..|.|..||.:|.     |.:
Zfish   355 PTAQIEEASQYDCAYEPMRPHTLQLKSTMSDSDQMLDGIKDHLLCLRDVLVERTKLQ-----LSQ 414

  Fly  1068 RIGRGNFGDVYKAKLKSTKLD----VAVKTCRMTL-PDEQKRKFLQEGRILKQYDHPNIVKLIGI 1127
            ::|:|.||.||:. :.|.|:.    |||||.:..: .:|....||:|..::|.:||.|:|||:|:
Zfish   415 KLGKGEFGAVYEG-IFSPKIGQDIRVAVKTSKDVIHSEEDLESFLKEAEMMKHFDHVNVVKLLGV 478

  Fly  1128 CVQKQP------IMIVMELVLGGSLLTYLRKNSNGLTTRQQ-----------MGMCRDAAAGMRY 1175
            .::..|      .::::..:....|.::||      .||..           :....|.||||.|
Zfish   479 ALEWDPESSMVVPLVILPYMKHRDLHSFLR------ATRYDDVPMFVPHQSLLRFMMDIAAGMEY 537

  Fly  1176 LESKNCIHRDLAARNCLVDLEHSVKISDFGMSR---EEEEYIVSDGMKQIPVKWTAPEALNFGKY 1237
            |..:..:|||||||||::..:..|.::|||:|:   ....|.......::||:|.|.|:::...:
Zfish   538 LSLQGFLHRDLAARNCMLGDDLRVCVADFGLSKMMYSSNYYRHKSQDVKLPVRWMAIESVSDFIF 602

  Fly  1238 TSLCDVWSYGILMWEIFSKGDTPYSGMTNSRARERIDTGYRMPTPKSTPEEMYRLMLQCWAADAE 1302
            |:..||||:|:.||||.|:|..||.|::|....:.::.|:|: :......::|.|||.||..|..
Zfish   603 TTKSDVWSFGVTMWEITSRGKVPYPGVSNYELLDYLEKGHRL-SQGDNDSKLYELMLSCWHRDPS 666

  Fly  1303 SRPHFDEIYNVVDALILRL 1321
            .||.|.|::..:.||:..|
Zfish   667 QRPSFGELHQSLSALLSEL 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 5/19 (26%)
TyrKc 1063..1311 CDD:197581 88/272 (32%)
PTKc_Fes_like 1067..1315 CDD:270637 87/272 (32%)
si:ch73-40a2.1XP_009301289.1 EphR_LBD 42..185 CDD:295439
STYKc 410..678 CDD:214568 89/280 (32%)
PTKc 415..678 CDD:270623 87/270 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100013
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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