DRSC/TRiP Functional Genomics Resources

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Protein Alignment FER and txk

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_003201292.4 Gene:txk / 100534735 ZFINID:ZDB-GENE-130530-553 Length:509 Species:Danio rerio


Alignment Length:380 Identity:136/380 - (35%)
Similarity:209/380 - (55%) Gaps:42/380 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   959 EWFHGVLPREEVVRLL---NNDGDFLVRETIRNEESQIVLSV---CWNGH---KHFIVQTTGEGN 1014
            :|:...:.|.|...||   ..||.|:||.:  ::.|...:||   | :|.   :|:.::.|.|..
Zfish   130 DWYCKNINRAEAEHLLRQEGKDGGFVVRSS--SQPSTYTVSVYTHC-SGKGEVRHYQIKRTDEDK 191

  Fly  1015 FRF-EGPPFASIQELI-MHQYHSELPVTVKSGAI--LRRPV-----CR--------ERWELSNDD 1062
            |.. |...|.||.||| .|:|::       :|.:  ||.|:     |:        ::.|::..:
Zfish   192 FYLAENHVFISIPELINYHKYNA-------AGLVARLRYPIGPKGKCQPATAGFSSDKMEINPSE 249

  Fly  1063 VVLLERIGRGNFGDVYKAKLKSTKLDVAVKTCRMTLPDEQKRKFLQEGRILKQYDHPNIVKLIGI 1127
            :..::.:|.|.||.|...|.:: :..||:||.|....:|.  .|::|.:|:.:..||.:|:|.|:
Zfish   250 LTFMKELGSGQFGVVRLGKWRA-QHKVAIKTIREGAMNED--DFIEEAKIMTRLCHPKLVQLYGV 311

  Fly  1128 CVQKQPIMIVMELVLGGSLLTYLRKNSNGLTTRQQMGMCRDAAAGMRYLESKNCIHRDLAARNCL 1192
            ||.::||.||.|.:..|.||.:||::|..|...|.:.||:|...||.|||....|||||||||||
Zfish   312 CVTQRPICIVTEFMENGCLLHFLRQHSKTLGRSQMLCMCQDVCEGMEYLEHNQFIHRDLAARNCL 376

  Fly  1193 VDLEHSVKISDFGMSRE--EEEYIVSDGMKQIPVKWTAPEALNFGKYTSLCDVWSYGILMWEIFS 1255
            |:..:.||:.||||:|.  :.:|..|.| .:.||||:.||.|:|.|:::..||||:|:||||:||
Zfish   377 VNERNVVKVCDFGMTRYVLDNQYTSSMG-SRFPVKWSPPEVLHFNKFSNKSDVWSFGVLMWEVFS 440

  Fly  1256 KGDTPYSGMTNSRARERIDTGYRMPTPKSTPEEMYRLMLQCWAADAESRPHFDEI 1310
            :|.||:...||....|.:..|.|:..|......:|.:|.:||......||.|.|:
Zfish   441 EGKTPFDNRTNVEVVEEVTQGSRLYRPHLATPHIYNIMYRCWHERPHGRPAFSEL 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 28/90 (31%)
TyrKc 1063..1311 CDD:197581 102/250 (41%)
PTKc_Fes_like 1067..1315 CDD:270637 102/246 (41%)
txkXP_003201292.4 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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