DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and erbb4

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_031748752.1 Gene:erbb4 / 100493234 XenbaseID:XB-GENE-877077 Length:1300 Species:Xenopus tropicalis


Alignment Length:261 Identity:91/261 - (34%)
Similarity:153/261 - (58%) Gaps:11/261 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly  1058 LSNDDVVLLERIGRGNFGDVYKA----KLKSTKLDVAVKTCRMTLPDEQKRKFLQEGRILKQYDH 1118
            |...::..::.:|.|.||.|||.    :.::.|:.||:|....|...:...:|:.|..|:...||
 Frog   704 LKETELKRIKILGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANAEFMDEALIMASMDH 768

  Fly  1119 PNIVKLIGICVQKQPIMIVMELVLGGSLLTYLRKNSNGLTTRQQMGMCRDAAAGMRYLESKNCIH 1183
            |::|:|:|:.: ...|.:|.:|:..|.||.|:.::.:.:.::..:..|...|.||.|||.:..:|
 Frog   769 PHLVRLLGVSL-SPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVH 832

  Fly  1184 RDLAARNCLVDLEHSVKISDFGMSR----EEEEYIVSDGMKQIPVKWTAPEALNFGKYTSLCDVW 1244
            |||||||.||...:.|||:|||::|    :|:||....|  ::|:||.|.|.:::.|:|...|||
 Frog   833 RDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGG--KMPIKWMALECIHYRKFTHQSDVW 895

  Fly  1245 SYGILMWEIFSKGDTPYSGMTNSRARERIDTGYRMPTPKSTPEEMYRLMLQCWAADAESRPHFDE 1309
            |||:.:||:.:.|..||.|:......:.::.|.|:|.|.....::|.:|::||..||:|||.|.|
 Frog   896 SYGVTVWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPVCTIDVYMVMVKCWMIDADSRPKFKE 960

  Fly  1310 I 1310
            :
 Frog   961 L 961

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224
TyrKc 1063..1311 CDD:197581 90/256 (35%)
PTKc_Fes_like 1067..1315 CDD:270637 90/252 (36%)
erbb4XP_031748752.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.