DRSC/TRiP Functional Genomics Resources

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Protein Alignment FER and lmtk2

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_002932018.3 Gene:lmtk2 / 100489240 XenbaseID:XB-GENE-980913 Length:1419 Species:Xenopus tropicalis


Alignment Length:285 Identity:81/285 - (28%)
Similarity:144/285 - (50%) Gaps:25/285 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly  1055 RWELSNDDVVLLERIGRGNFGDVYKAKL--KSTKLDVAVKTCRMTLPDEQKRKFLQEGRILKQYD 1117
            ::::....:..::.||.|.||.|...::  :::...|.||..:.:...:::..|:..|.......
 Frog   126 KYQIPRHSLSYIQEIGNGWFGKVLLGEIYRENSVARVIVKELKASANPKEQDHFINHGEPYSFLH 190

  Fly  1118 HPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLR------KNSNGLTTRQQMGMCRDAAAGMRYL 1176
            |||||:.:|.|::..|.::|.||...|.|.|||.      |....:...|:|. |: .|||:..:
 Frog   191 HPNIVQCVGHCIETMPYLLVFELCDLGDLKTYLTNQREKLKGDTEIVLLQRMA-CQ-IAAGLAIM 253

  Fly  1177 ESKNCIHRDLAARNCLVDLEHSVKISDFGM--SREEEEYIVSDGMKQIPVKWTAPE-------AL 1232
            ...|.:|.|||.|||.|..:.:|||.|:|:  :|.:|:|:.:...|.|||:|||||       .|
 Frog   254 HKHNFVHSDLALRNCYVTSDLTVKIGDYGIGFTRYKEDYMETTEEKFIPVRWTAPELVTSYQDQL 318

  Fly  1233 NFGKYTSLCDVWSYGILMWEIFSKGDTPYSGMTNSRARERI--DTGYRMPTPK-STP--EEMYRL 1292
            .....|...::||.|:.:||:|....|||..:::|....::  ....::|.|: ..|  :..|.:
 Frog   319 LVADQTKSSNIWSLGVTLWELFENAATPYEDLSDSEVLAQVIKQREVKLPNPQLEQPYADRWYEV 383

  Fly  1293 MLQCWAADAESRPHFDEIYNVVDAL 1317
            :..||.. ::.|...:|::.::..|
 Frog   384 LQFCWLT-SDKRLTAEEVHRLLTYL 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224
TyrKc 1063..1311 CDD:197581 80/269 (30%)
PTKc_Fes_like 1067..1315 CDD:270637 80/269 (30%)
lmtk2XP_002932018.3 PTKc_Aatyk2 136..406 CDD:270669 80/272 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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