DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FER and si:ch73-340m8.2

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:XP_002665190.3 Gene:si:ch73-340m8.2 / 100332982 ZFINID:ZDB-GENE-110411-209 Length:480 Species:Danio rerio


Alignment Length:487 Identity:146/487 - (29%)
Similarity:223/487 - (45%) Gaps:63/487 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   877 CNCPPAGQKPVKP-----SVQISGHKDHPFESSSG---------ELDENSDRDIDNDEE------ 921
            |.|.|....|..|     ..|.|.::|..:.|...         .|.:....::..:.|      
Zfish     4 CECKPKCCCPCCPCCLTKDQQASVNRDRVYTSIYSYPSRTIWDLNLRKGDILEVTGETEYWLYVR 68

  Fly   922 EEDSASDDVLS-MKDHCYCVPSLAASISLSTNRPLYEEEWFHGVLPREEVVRLL----NNDGDFL 981
            ...:.:|...| :::|.|........:......|.|    |..|..|.|..|.|    |.:|.||
Zfish    69 RRTAKTDKSKSFIEEHGYVPKDFVKPLDSVEAEPWY----FENVKTRVEAKRCLLRPENKEGAFL 129

  Fly   982 VRETIRNEESQIVLSVCWNGH-KHFIVQTTGEGNFRF---EGPPFASIQELIMHQYHSE----LP 1038
            |.:.  :|.:...|||....| :|:.:: .||.:.:|   ....|.|:::||  :::|:    |.
Zfish   130 VWKC--DENNHYYLSVKNGPHARHYRIK-QGENDQQFFLVHHTTFQSLRKLI--EFYSKHEGGLC 189

  Fly  1039 VTVKSGAI-LRRPVCR-----ERWELSNDDVVLLERIGRGNFGDVYKAKLKSTKLDVAVKTCR-M 1096
            ..:....: |.:||.:     .:.|:....:...:::|.|.|.||::....:| .:||:|..: :
Zfish   190 AKLHEACVKLDQPVPQTLSFDSKCEIDRSSLTKQQKLGSGEFADVWQGLWNNT-TEVAIKEFKGV 253

  Fly  1097 TLPDEQKRKFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYL--RKNSNGLTT 1159
            ...|.|     .|..|:|...|..::||..:|...||:.||.||:..|||.|:|  .|....|..
Zfish   254 NYSDIQ-----TEIEIMKDLHHERLLKLYAVCTTSQPMCIVTELMKNGSLKTFLLRHKEKQDLEF 313

  Fly  1160 RQQMGMCRDAAAGMRYLESKNCIHRDLAARNCLVDLEHSVKISDFGM---SREEEEYIVSDGMKQ 1221
            ...:........||.|:|:| .:||||.|.|.|:....|.||:|||:   :|...:.|.||  .:
Zfish   314 SLMLDFAIQITEGMIYIENK-IVHRDLRAENILLTEMQSCKIADFGLAQVNRPGNQRISSD--VR 375

  Fly  1222 IPVKWTAPEALNFGKYTSLCDVWSYGILMWEIFSKGDTPYSGMTNSRARERIDTGYRMPTPKSTP 1286
            :||||.|||..:.|:|||..||||:|||:.||.:.||.||.|.........|..|.|||.|...|
Zfish   376 LPVKWMAPEIFDNGEYTSKSDVWSFGILLTEIVTYGDDPYPGQDKMSCVRGIQRGERMPRPAGCP 440

  Fly  1287 EEMYRLMLQCWAADAESRPHFDEIYNVVDALI 1318
            |.:|.:||.||.|:.:.||.|.|:..::.|||
Zfish   441 ESLYGIMLLCWKANPKERPTFTELREMLMALI 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 28/97 (29%)
TyrKc 1063..1311 CDD:197581 96/253 (38%)
PTKc_Fes_like 1067..1315 CDD:270637 96/253 (38%)
si:ch73-340m8.2XP_002665190.3 SH2 99..192 CDD:301589 28/101 (28%)
Pkinase_Tyr 220..468 CDD:285015 96/256 (38%)
PKc_like 225..468 CDD:304357 96/251 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.