DRSC/TRiP Functional Genomics Resources

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Protein Alignment FER and grap

DIOPT Version :9

Sequence 1:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster
Sequence 2:NP_001332868.1 Gene:grap / 100127598 XenbaseID:XB-GENE-6258733 Length:219 Species:Xenopus tropicalis


Alignment Length:83 Identity:24/83 - (28%)
Similarity:40/83 - (48%) Gaps:8/83 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   960 WFHGVLPR---EEVVRLLNNDGDFLVRETIRNEESQIVLSVCWNGH-KHFIV--QTTGEGNFRFE 1018
            |:.|.:.|   ||::...|..|.||:|:: .:......:||.:..| :||.|  .|...|.:...
 Frog    60 WYAGRISRQVAEEILLKRNFVGAFLIRDS-ESSPGDFSISVNYGHHVQHFKVLRDTESNGKYYLW 123

  Fly  1019 GPPFASIQELI-MHQYHS 1035
            ...|.|:.||: .::.||
 Frog   124 EAKFNSLNELVDYYRRHS 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 24/83 (29%)
TyrKc 1063..1311 CDD:197581
PTKc_Fes_like 1067..1315 CDD:270637
grapNP_001332868.1 SH3_GRAP_N 2..55 CDD:212881
SH2_Grb2_like 56..152 CDD:199828 24/83 (29%)
SH3_GRAP_C 161..213 CDD:212884
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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