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Protein Alignment FER and mst1ra

DIOPT Version :9

Sequence 1:	NP_524288.3	Gene:	FER / 41118	FlyBaseID:	FBgn0000723	Length:	1325	Species:	Drosophila melanogaster
Sequence 2:	XP_005166175.1	Gene:	mst1ra / 100002448	ZFINID:	ZDB-GENE-071218-2	Length:	1356	Species:	Danio rerio

Alignment Length:	839	Identity:	189/839 - (22%)
Similarity:	329/839 - (39%)	Gaps:	205/839 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly   631 DELNRVLDDRLKRTLQPSDDVNAI-------ESA------EENHIQTRKLAKDPDSQTKRSSSSS 682
            |....|:.....||: ||:..:.:       :||      :|:| |.|....|.....:::|||.
Zfish   546 DSCPPVITQFFPRTV-PSNGTSELILCGWNFQSASRPAITQESH-QVRVGNSDCTVVPEKTSSSL 608

  Fly   683 SECRSSKDTS------------HSKK-------------RSLSFSQKSISNIFSNLKEFSKSPLV 722
            ..||...:.|            :.||             :..||....|::|..:........|:
Zfish   609 LVCRIVGEESGLHQSVNITIQVNEKKAGSGYFISGKAGIQGFSFVTPEITDISPSFGPKIGGTLI 673

  Fly   723 RMGKNHILNEEQDAKRTQPSQHHHSSGS-DCPTNSSSSSSNNNNNNKNTSSNSNHSASQSTIITS 786
            .:...|:   :....||      .|.|. :||..|.||...:.........::.....:..|..|
Zfish   674 TLSGKHL---DAGGSRT------ISLGDRNCPVESVSSDGTSIVCRSEGVKDTLEVDVKVVIDGS 729

  Fly   787 TITTTITTTTTTTP--SKENSRLKFKVPKIQKKSKAIRNTFRSKLLNFQLKRSKPCKQCTKRRRI 849
            ||::|.|.:....|  :..|....|:     :.||.|                     .|.:...
Zfish   730 TISSTKTFSYRVNPEVTGVNPNCGFR-----RGSKII---------------------ITGQNLD 768

  Fly   850 HPSKSVFDFAKEFE--VEQPAGSAAD--EQFCNCPPAGQKPVKPSVQISGHKD--------H--- 899
            ..|::|..:...::  ||.......:  :..|..|...:.....||.:.|.||        |
Zfish   769 SVSQAVIKYKGGYKDPVETVCSGQGNPTQMECMSPVCEESTGILSVDLDGAKDLQSQTFTCHANG 833

  Fly   900 ---PFESSSGELDENSDRDIDNDEEEEDSASDDVLSMKDHCY---------------------C- 939
               |||:....|:.:..:|       |.|.....|::...|.                     |
Zfish   834 EPIPFETEDRVLELSPGQD-------EVSLHHKKLALVSGCMEIIMTVNGVDCNAKVLDNEITCR 891

  Fly   940 ------VPSLAASISLSTNRPLYEEEWFHGVLPREE-------VVRLLNNDG-----DFLVRETI 986
                  :|...|.:.:..||    ||...|::..:.       |:.:|...|     .::.....
Zfish   892 IPKNLTIPRQGAPVKVLVNR----EEHDIGMVVMKNSNLIVGVVLGILAAVGVGAAIVYVAMAQE 952

  Fly   987 RNEESQIVLSVCWNGHKHFIVQTTGE-------GNFRFE---------------GPPFASI---- 1025
            |.::...::.|..:.|.:   :||.|       |::|.|               |..|.|:
Zfish   953 RKKKKAALVEVRLSMHSN---RTTAENYDRSPDGDYRRETVRPAGLSVSPFHGSGTTFTSLPYAG 1014

  Fly  1026 -----------QELIMHQYHSELPVTVKSGAILRRPVCRERWELSNDDVVLLERIGRGNFGDVYK 1079
                       :::.|.....:|...||:  :|..|   ::.::.::.:     ||:|:||.||.
Zfish  1015 SMDSAAAPLMRRQVSMSALRPDLLEEVKN--VLISP---DKIKIQHEQI-----IGKGHFGTVYH 1069

  Fly  1080 AKLKST---KLDVAVKTCRMTLPDEQKRKFLQEGRILKQYDHPNIVKLIGICVQKQPI-MIVMEL 1140
            ..|..:   :...|||:.......|:..:||:||..:|.:.|.:::.|:||.:....: ::::..
Zfish  1070 GYLTDSDNKETHCAVKSLNRITDLEEVEQFLREGLFMKAFHHSHVLSLLGIVLPSDGLPLVILPY 1134

  Fly  1141 VLGGSLLTYLRKNSNGLTTRQQMGMCRDAAAGMRYLESKNCIHRDLAARNCLVDLEHSVKISDFG 1205
            :..|.|..::|......|.:..:|.....|.||.||.:|..:|||||||||::|...:||::|||
Zfish  1135 MKHGDLRHFIRSPERSPTVKDLIGFGLQVAKGMEYLANKKFVHRDLAARNCMLDESFTVKVADFG 1199

  Fly  1206 MSR---EEEEYIVSDGMK-QIPVKWTAPEALNFGKYTSLCDVWSYGILMWEIFSKGDTPYSGMTN 1266
            |:|   ::|.|.:.|..| ::||||.|.|:|...|:|:..||||||:||||:.::|.:||..:..
Zfish  1200 MARDVYDKEYYSIQDSKKAKLPVKWMALESLQTQKFTTKSDVWSYGVLMWELLTRGASPYPDVDP 1264

  Fly  1267 SRARERIDTGYRMPTPKSTPEEMYRLMLQCWAADAESRPHFDEIYNVVDALILRLDNSH 1325
            ......:..|.|:|.|:...:.::.:::|||..:.|.||.|..:...|..:...||..|
Zfish  1265 YDITPYLMQGRRLPQPQYCFDSLWSVLMQCWHPEPEKRPGFTTLVQAVQDIHSSLDGEH 1323

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.