DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG45050 and rabx-5

DIOPT Version :9

Sequence 1:	NP_001027161.1	Gene:	CG45050 / 41114	FlyBaseID:	FBgn0266410	Length:	199	Species:	Drosophila melanogaster
Sequence 2:	NP_001360492.1	Gene:	rabx-5 / 176481	WormBaseID:	WBGene00012644	Length:	520	Species:	Caenorhabditis elegans

Alignment Length:	201	Identity:	48/201 - (23%)
Similarity:	77/201 - (38%)	Gaps:	51/201 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MERESNPMQPMCRSGCGFYGNPATDGLCSVCYK---DSLRKKQQPPVSSTPVSVPSPQ---PSPT 59
            |..::|.:  :|.:||||||.|..:..||.|::   :.::|.|....:.:.:|....|   .|.|
Worm    14 MHLKANDL--LCVNGCGFYGTPQWENRCSKCWRAHQNEMKKCQDFAKNRSLLSFDQFQERRKSTT 76

  Fly    60 FSPAIAITN-----------TAQPTVTS-LQQP--HNDVKEKITEEAAAAAKVNSEAITSATGPN 110
            .|.:..|.|           |:.||.|| ...|  |:..:|...:...|     .:..|.....|
Worm    77 ESKSRGIKNLFKTSPIPEGGTSSPTSTSPASTPTRHSRRRELSPDSLEA-----RQQFTDFLVAN 136

  Fly   111 TSTQAAASANEEDDKDKEDDKDAKKKKNRCGECR------KKVGLTGFQC---RCGGLYCAVHRY 166
            .||..|          :|..:..|...|:..|.|      .::.::.:|.   |.||     |..
Worm   137 LSTGMA----------QEIARSVKNAVNKISEMRMSSDDMSELVMSYYQYLGERIGG-----HSL 186

  Fly   167 SDKHNC 172
            .|..:|
Worm   187 FDSPDC 192

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG45050	NP_001027161.1	zf-A20	11..32	CDD:396357	10/20 (50%)
		rad23	37..>120	CDD:273167	23/99 (23%)
		ZnF_AN1	140..177	CDD:197545	9/42 (21%)
rabx-5	NP_001360492.1	zf-A20	21..44	CDD:366793	11/24 (46%)
		DUF5601	147..212	CDD:375592	11/51 (22%)
		VPS9	259..361	CDD:366977
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910