DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12951 and F11

DIOPT Version :10

Sequence 1:NP_649880.1 Gene:CG12951 / 41110 FlyBaseID:FBgn0037677 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_001398595.1 Gene:F11 / 290757 RGDID:1309364 Length:622 Species:Rattus norvegicus


Alignment Length:239 Identity:85/239 - (35%)
Similarity:125/239 - (52%) Gaps:20/239 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RVVNGTDSSVLKYPFVVSLRSYDGSHSCGGSIISKHFVMTAAHCTNG-RPADTLSIQFGVTNISA 92
            ||..|..|...::|:.|:|.:..| |.||||||...:::|||||.:| ....||.:..|:.|.|.
  Rat   387 RVFGGAASVHGEWPWQVTLHTTQG-HLCGGSIIGNRWILTAAHCFSGTETPKTLRVYGGIVNQSE 450

  Fly    93 MGPNVV--GIKKIIQHEDFDPTRQNANDISLLMVEEPFEFDGVSVAPVELPALAFAVPQSDAGV- 154
            :..:..  .::::|.|:.: .:.::..||:||.:|....:.... .|:.||:      :.|..| 
  Rat   451 INEDTTFFRVQEMIIHDQY-TSAESGFDIALLKLEPAMNYTDFQ-RPICLPS------KGDRNVV 507

  Fly   155 --EGVLIGWGLNDTYGSVQDTLQEVSLKIYSDEECTSRHNGQTDPKYHICGGVDEGGKGQCSGDS 217
              |..:.|||...:...||.|||:..:.:.|:|||.:|:.........||.|..||||..|.|||
  Rat   508 HTECWVTGWGYTKSRDEVQSTLQKAKVPLVSNEECQTRYRKHKITNKVICAGYKEGGKDTCKGDS 572

  Fly   218 GGPLI--YNG--QQVGIVSWSIKPCTVAPYPGVYCKVSQYVDWI 257
            ||||.  :||  ..|||.||. :.|.....||||..|::|||||
  Rat   573 GGPLSCKHNGVWHLVGITSWG-EGCGQKERPGVYTNVAKYVDWI 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12951NP_649880.1 Tryp_SPc 30..260 CDD:238113 84/238 (35%)
F11NP_001398595.1 APPLE 20..103 CDD:128519
APPLE 110..193 CDD:128519
APPLE 200..283 CDD:128519
APPLE 291..374 CDD:128519
Tryp_SPc 388..615 CDD:238113 82/236 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.