DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12951 and St14

DIOPT Version :9

Sequence 1:NP_649880.1 Gene:CG12951 / 41110 FlyBaseID:FBgn0037677 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_446087.1 Gene:St14 / 114093 RGDID:69288 Length:855 Species:Rattus norvegicus


Alignment Length:248 Identity:83/248 - (33%)
Similarity:124/248 - (50%) Gaps:27/248 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SRVVNGTDSSVLKYPFVVSLRSYDGSHSCGGSIISKHFVMTAAHC----TNGRPAD-TLSIQF-G 86
            :|||.||::...::|:.|||.:....|.||.|:||..::::||||    |..:.:| |:...| |
  Rat   613 ARVVGGTNADEGEWPWQVSLHALGQGHLCGASLISPDWLVSAAHCFQDETIFKYSDHTMWTAFLG 677

  Fly    87 V---TNISAMGPNVVGIKKIIQHEDFDPTRQNANDISLLMVEEPFEFDGVSVAPVELPALAFAVP 148
            :   :..||.|.....:|:||.|..|:....: .||:||.:|:|.|:..| |.|:.||......|
  Rat   678 LLDQSKRSASGVQEHKLKRIITHPSFNDFTFD-YDIALLELEKPAEYSTV-VRPICLPDNTHVFP 740

  Fly   149 QSDAGVEGVLIGWGLNDTYGSVQDTLQEVSLKIYSDEECTSRHNGQTDPKYHICGGVDEGGKGQC 213
               ||....:.|||.....|:....||:..:::.:...|......|..|:. :|.|...||...|
  Rat   741 ---AGKAIWVTGWGHTKEGGTGALILQKGEIRVINQTTCEELLPQQITPRM-MCVGFLSGGVDSC 801

  Fly   214 SGDSGGPL--------IYNGQQVGIVSWSIKPCTVAPYPGVYCKVSQYVDWIK 258
            .|||||||        |:   |.|:|||. :.|.....||||.::.:..||||
  Rat   802 QGDSGGPLSSVEKDGRIF---QAGVVSWG-EGCAQRNKPGVYTRIPEVRDWIK 850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12951NP_649880.1 Tryp_SPc 29..257 CDD:214473 80/244 (33%)
Tryp_SPc 30..260 CDD:238113 82/246 (33%)
St14NP_446087.1 SEA 88..178 CDD:396113
CUB 214..332 CDD:238001
CUB 340..444 CDD:238001
LDLa 454..486 CDD:238060
LDLa 492..523 CDD:238060
LDLa 525..559 CDD:238060
LDLa 567..602 CDD:238060
Tryp_SPc 615..852 CDD:238113 82/246 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D433637at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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