DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12951 and tmprss6

DIOPT Version :9

Sequence 1:NP_649880.1 Gene:CG12951 / 41110 FlyBaseID:FBgn0037677 Length:265 Species:Drosophila melanogaster
Sequence 2:XP_004913946.2 Gene:tmprss6 / 100489045 XenbaseID:XB-GENE-1011573 Length:806 Species:Xenopus tropicalis


Alignment Length:242 Identity:69/242 - (28%)
Similarity:122/242 - (50%) Gaps:19/242 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 RVVNGTDSSVLKYPFVVSLRSYDGSHSCGGSIISKHFVMTAAHC----TNGRPADTLSIQFGVTN 89
            |:|.||.:...::|:..||: ..|.|.|||::::..:::|||||    :...| :..::..|...
 Frog   570 RLVGGTQAQEGEWPWQASLQ-VRGEHICGGTLVADQWILTAAHCFTPESYASP-EVWTVYLGKVR 632

  Fly    90 ISAMGPNVVGIK--KIIQHEDFDPTRQNANDISLLMVEEPFEFDGVSVAPVELPALAFAVPQSDA 152
            :|......:..|  :::.|..:|....: .|::|::::.........|.|:.||:.....|   .
 Frog   633 LSRSTQKELAFKVIRLVIHPFYDEDSHD-YDVALVLLDHLVPLTSPHVQPICLPSSTHHFP---T 693

  Fly   153 GVEGVLIGWGLNDTYGSVQDTLQEVSLKIYSDEECTSRHNGQTDPKYHICGGVDEGGKGQCSGDS 217
            |....:.|||.....|...|.||:|.:::.:.:.||..:..|..|:. :|.|..:|.|..|.|||
 Frog   694 GSSCWVTGWGSVKENGPTSDVLQKVDIQLVAQDICTELYRYQISPRM-LCAGYRDGSKDACQGDS 757

  Fly   218 GGPLI---YNGQ--QVGIVSWSIKPCTVAPYPGVYCKVSQYVDWIKS 259
            |.||:   .:|:  |.|:|||. ..|.:..|.|||.::::.|.||:|
 Frog   758 GSPLVCKTASGRWFQAGLVSWG-AGCGIPRYFGVYSRITRLVQWIES 803

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12951NP_649880.1 Tryp_SPc 29..257 CDD:214473 66/238 (28%)
Tryp_SPc 30..260 CDD:238113 68/241 (28%)
tmprss6XP_004913946.2 SEA 77..176 CDD:396113
CUB 235..303 CDD:412131
LDLa 448..478 CDD:238060
LDLa 480..514 CDD:238060
LDLa 525..560 CDD:238060
Tryp_SPc 572..804 CDD:238113 68/240 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D433637at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.