DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HP1e and Cbx6

DIOPT Version :10

Sequence 1:NP_649878.1 Gene:HP1e / 41108 FlyBaseID:FBgn0037675 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_083039.2 Gene:Cbx6 / 494448 MGIID:3512628 Length:414 Species:Mus musculus


Alignment Length:110 Identity:29/110 - (26%)
Similarity:49/110 - (44%) Gaps:17/110 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 YIVERILDRRHYMGQLQYLVKWLDYSDEDNTWESAADLDCHSLIDSIESQK-------SLKRGQE 84
            :..|.|:.||...|:::|||||..::.:.:|||...::....||.:.|.::       ..|||.:
Mouse    11 FAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQKERERELYGPKKRGPK 75

  Fly    85 -----LNNQYETKAKRL-----KIDPCLVVDSPFNHGFTAQEILK 119
                 |..:.:.:|.|:     .:.|.....||..|...|...||
Mouse    76 PKTFLLKARAQAEALRISDVHFSVKPSASASSPKLHSSAAVHRLK 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HP1eNP_649878.1 CD_CSD 27..71 CDD:349274 14/43 (33%)
CSD_HP1e_insect 111..163 CDD:349337 3/9 (33%)
Cbx6NP_083039.2 CD_Cbx6 8..65 CDD:349295 16/53 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..152
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 267..308
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 344..365
CBX7_C 359..390 CDD:465385
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.