DRSC/TRiP Functional Genomics Resources

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Protein Alignment HP1e and Su(var)205

DIOPT Version :10

Sequence 1:NP_649878.1 Gene:HP1e / 41108 FlyBaseID:FBgn0037675 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_476755.1 Gene:Su(var)205 / 34119 FlyBaseID:FBgn0003607 Length:206 Species:Drosophila melanogaster


Alignment Length:204 Identity:62/204 - (30%)
Similarity:98/204 - (48%) Gaps:41/204 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDSDADGGETVSNFSENSTDFEETEEYIVERILDRRHYMGQLQYLVKWLDYSDEDNTWESAADLD 65
            |....|..|:.:..|:..   ||.|||.||:|:|||...|:::|.:||..|.:.:||||...:||
  Fly     1 MGKKIDNPESSAKVSDAE---EEEEEYAVEKIIDRRVRKGKVEYYLKWKGYPETENTWEPENNLD 62

  Fly    66 CHSLIDSIE-------------------SQKSLKRGQELNNQYETKAKRLKIDPCL--------V 103
            |..||...|                   |.|:.:.....::...|.:||...:|..        .
  Fly    63 CQDLIQQYEASRKDEEKSAASKKDRPSSSAKAKETQGRASSSTSTASKRKSEEPTAPSGNKSKRT 127

  Fly   104 VDSP-----------FNHGFTAQEILKGAKNNGEISFLIRFWHLDQPQVVPSGIAYVEIPQMVLK 157
            .|:.           |:.|..|::||..:.|||.::|||:|..:||.::|||.:|..:||:||:.
  Fly   128 TDAEQDTIPVSGSTGFDRGLEAEKILGASDNNGRLTFLIQFKGVDQAEMVPSSVANEKIPRMVIH 192

  Fly   158 FYENHCNFH 166
            |||...:::
  Fly   193 FYEERLSWY 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HP1eNP_649878.1 CD_CSD 27..71 CDD:349274 20/43 (47%)
CSD_HP1e_insect 111..163 CDD:349337 24/51 (47%)
Su(var)205NP_476755.1 CD_HP1a_insect 24..72 CDD:349300 21/47 (45%)
CSD_HP1a_insect 146..198 CDD:349305 24/51 (47%)

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