Protein Alignment HP1e and cbx1a

DIOPT Version :10

• Sequence 1: NP_649878.1
• Gene: HP1e / 41108
• FlyBaseID: FBgn0037675
• Length: 174
• Species: Drosophila melanogaster
• Sequence 2: NP_956040.2
• Gene: cbx1a / 326746
• ZFINID: ZDB-GENE-030131-4945
• Length: 212
• Species: Danio rerio
• Alignment Length: 160
• Identity: 56/160 - (35%)
• Similarity: 87/160 - (54%)
• Gaps: 17/160 - (10%)

  Fly    22 EETEEYIVERILDRRHYMGQLQYLVKWLDYSDEDNTWESAADLDCHSLI-----------DSIES 75
            ||.|||:||::||||...|:::||:||..:|:||||||...:|||..||           |..||
Zfish    45 EEEEEYVVEKVLDRRVVKGRVEYLLKWKGFSEEDNTWEPEDNLDCPDLIAEYMTKHKINDDKKES 109

  Fly    76 QKSLKRGQELNNQYETKAKRLKIDPCLVVDSP--FNHGFTAQEILKGAKNNGEISFLIRFWHLDQ 138
            ....|.........:::.|:.|.:.    |.|  |..|...:.|:....::||:.||:::.:.|:
Zfish   110 SAKRKESDTDGGGEDSRPKKRKDEQ----DKPRGFARGLDPERIIGATDSSGELMFLMKWKNSDE 170

  Fly   139 PQVVPSGIAYVEIPQMVLKFYENHCNFHDY 168
            ..:||:..|.|:.||:|:.|||....:|.|
Zfish   171 ADLVPAKEANVKCPQVVISFYEERLTWHSY 200

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HP1e	NP_649878.1	CD_CSD	27..71	CDD:349274	24/54 (44%)
		CSD_HP1e_insect	111..163	CDD:349337	17/51 (33%)
cbx1a	NP_956040.2	CD_CSD	56..98	CDD:475127	21/41 (51%)
		CSD_HP1beta_Cbx1	139..196	CDD:349301	18/56 (32%)