DRSC/TRiP Functional Genomics Resources

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Protein Alignment HP1e and hpl-2

DIOPT Version :10

Sequence 1:NP_649878.1 Gene:HP1e / 41108 FlyBaseID:FBgn0037675 Length:174 Species:Drosophila melanogaster
Sequence 2:NP_001022654.1 Gene:hpl-2 / 176506 WormBaseID:WBGene00001996 Length:303 Species:Caenorhabditis elegans


Alignment Length:164 Identity:37/164 - (22%)
Similarity:70/164 - (42%) Gaps:53/164 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SENSTDFEETEE-----YIVERILDRR-HYMGQLQYLVKWLDYSDEDNTWESAADLDCHSLIDSI 73
            |..||...:.|:     ::||::||:| ...|:.::|::|..:.:.|::||...:|.|..::|..
 Worm     2 SSKSTKRAKIEDPKDNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66

  Fly    74 ESQ----------------------------KSLKRGQELNNQYETKAKRLKIDPCLVVDSPFNH 110
            |.:                            |..|:....|:::..:.|:||   |:|       
 Worm    67 EREFSKREKPIRKRHSQKPEPSEDQADPEEDKDEKKETNQNDKFSLEGKQLK---CIV------- 121

  Fly   111 GFTAQEILKGAKNNGEISFLIRFWHLDQPQVVPS 144
            |.|        |..||:.||.:|.. |..:::|:
 Worm   122 GLT--------KGPGELHFLCKFSD-DTARLLPA 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HP1eNP_649878.1 CD_CSD 27..71 CDD:349274 13/44 (30%)
CSD_HP1e_insect 111..163 CDD:349337 10/34 (29%)
hpl-2NP_001022654.1 CD_HP1_like 18..68 CDD:349316 14/49 (29%)
CD_CSD 109..>153 CDD:475127 15/57 (26%)

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