DRSC/TRiP Functional Genomics Resources

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Protein Alignment HP1e and ucn3

DIOPT Version :10

Sequence 1:NP_649878.1 Gene:HP1e / 41108 FlyBaseID:FBgn0037675 Length:174 Species:Drosophila melanogaster
Sequence 2:XP_017948238.1 Gene:ucn3 / 100488336 XenbaseID:XB-GENE-5829753 Length:154 Species:Xenopus tropicalis


Alignment Length:100 Identity:24/100 - (24%)
Similarity:39/100 - (39%) Gaps:23/100 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ILDRRHYMGQLQYLVKWLDYSDEDN-----TWESAADLDCHSLIDSIESQKSLKRGQELNNQYET 91
            :|.:|.|..:.:..:...:..:|::     |:..||            ..:.|.:.|.....|:.
 Frog    51 VLSKREYEFEPRETLSQEEMDEEEDEKEKRTFPQAA------------RYRYLSQAQVKGKVYQN 103

  Fly    92 KAK---RLKIDPCLVVDSPFNHGFTAQEILKGAKN 123
            |||   |.|.  .|.:|.|.|......:|.| |||
 Frog   104 KAKSDRRTKF--TLSLDVPTNLMNILFDIAK-AKN 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HP1eNP_649878.1 CD_CSD 27..71 CDD:349274 7/43 (16%)
CSD_HP1e_insect 111..163 CDD:349337 4/12 (33%)
ucn3XP_017948238.1 CRF 113..150 CDD:425703 8/25 (32%)

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