DRSC/TRiP Functional Genomics Resources

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Protein Alignment sage and Olig1

DIOPT Version :9

Sequence 1:NP_524287.1 Gene:sage / 41105 FlyBaseID:FBgn0037672 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_068538.2 Gene:Olig1 / 60394 RGDID:621129 Length:261 Species:Rattus norvegicus


Alignment Length:159 Identity:49/159 - (30%)
Similarity:68/159 - (42%) Gaps:38/159 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 PTYSVIPQPVSMWHAGQVATGSPVGLECNKPSELV---PPPMYMSYSGGSIANST---------- 157
            |...:.||     ..|.|..|:.:       .|||   .||:..|.|..|.:.::          
  Rat    14 PATMLRPQ-----RPGDVQLGASL-------YELVGYRQPPISSSSSTSSSSTASLLPKPAREKP 66

  Fly   158 EVDIAKEHNPAWRE-------KALQMEKDYRRTACDRERTRMRDMNRAFDLLRSK-LPISKPN-- 212
            |..:|:...||...       |..|.::..||....|||.||:|:|.|.|.||.. ||.|..:  
  Rat    67 EAPLAEPRGPAPESGGARADAKEEQQQQQLRRKINSRERKRMQDLNLAMDALREVILPYSAAHCQ 131

  Fly   213 ---GKKYSKIESLRIAINYINHLQAMLRE 238
               |:|.|||.:|.:|.|||..|.:.|:|
  Rat   132 GAPGRKLSKIATLLLARNYILLLGSSLQE 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sageNP_524287.1 HLH 181..233 CDD:278439 26/57 (46%)
Olig1NP_068538.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 41..105 14/63 (22%)
bHLH_TS_OLIG1 96..165 CDD:381512 29/65 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3898
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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