DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sage and olig2

DIOPT Version :9

Sequence 1:NP_524287.1 Gene:sage / 41105 FlyBaseID:FBgn0037672 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_835201.1 Gene:olig2 / 325288 ZFINID:ZDB-GENE-030131-4013 Length:273 Species:Danio rerio


Alignment Length:137 Identity:42/137 - (30%)
Similarity:61/137 - (44%) Gaps:26/137 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 TGSPVGLECNKPSELVPPPMYMSYSGGSI--ANSTEVD------IAKEHNPAWREKALQMEKDYR 181
            :|:....:.:.|.||         .|..:  .:|.|.|      ::|:......|..||   ..|
Zfish    32 SGAVSSTQSDSPPEL---------RGADMRGISSAEEDSMALKMLSKKDRKLLSENELQ---SMR 84

  Fly   182 RTACDRERTRMRDMNRAFDLLRSKLPISK-PNGKKYSKIESLRIAINYI----NHLQAMLR-ESS 240
            .....|||.||.|:|.|.|.||..:|.:. |:.:|.|||.:|.:|.|||    |.|:.|.| .|.
Zfish    85 LKINSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLSNSLEEMKRLVSE 149

  Fly   241 VGQNGNG 247
            :...|:|
Zfish   150 IYGGGSG 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sageNP_524287.1 HLH 181..233 CDD:278439 24/56 (43%)
olig2NP_835201.1 HLH 88..142 CDD:197674 24/53 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3898
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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