DRSC/TRiP Functional Genomics Resources

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Protein Alignment sage and Mesp1

DIOPT Version :9

Sequence 1:NP_524287.1 Gene:sage / 41105 FlyBaseID:FBgn0037672 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_001101001.1 Gene:Mesp1 / 308766 RGDID:1311751 Length:242 Species:Rattus norvegicus


Alignment Length:202 Identity:57/202 - (28%)
Similarity:77/202 - (38%) Gaps:64/202 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 PPTYSVIPQPV----SM----------------WHAGQVATGSPVGLECNKPSELVPPPMYMSYS 149
            |.:.|.||.|.    ||                |...|.:  || .|.|.:|:.....|......
  Rat     8 PLSKSWIPSPARPQPSMPSDGDSFCSPAWSSDSWDGAQAS--SP-ALPCARPARRAGTPGRRGTH 69

  Fly   150 GGSIANSTEVDIAKEHNPAWREKALQMEKDYRRTACDRERTRMRDMNRAFDLLRSKLPIS-KPNG 213
            |..:.:.                       .|::|.:||:.|||.:.||...||..||.| .|.|
  Rat    70 GSRLGSG-----------------------QRQSASEREKLRMRTLARALHELRRFLPPSVAPIG 111

  Fly   214 KKYSKIESLRIAINYINHLQAM--LRESSVGQ-----NGNGC--CAWSGGSS--------SPYDN 261
            :..:|||:||:||.||.||.|:  |.|.|:.|     :..||  |..||.:.        ||...
  Rat   112 QNLTKIETLRLAIRYIGHLSAVLGLSEDSLRQQRHAVSPRGCPLCPDSGLAQAQSLGPHLSPVAC 176

  Fly   262 GNDHWGA 268
            ....||:
  Rat   177 SGVSWGS 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sageNP_524287.1 HLH 181..233 CDD:278439 26/52 (50%)
Mesp1NP_001101001.1 HLH 77..130 CDD:278439 25/52 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343764
Domainoid 1 1.000 49 1.000 Domainoid score I11472
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
54.800

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