DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sage and Neurog1

DIOPT Version :9

Sequence 1:NP_524287.1 Gene:sage / 41105 FlyBaseID:FBgn0037672 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_062080.1 Gene:Neurog1 / 29410 RGDID:3167 Length:244 Species:Rattus norvegicus


Alignment Length:110 Identity:43/110 - (39%)
Similarity:55/110 - (50%) Gaps:13/110 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 REKAL--QMEKDYRRTACDRERTRMRDMNRAFDLLRSKLPISKPNGKKYSKIESLRIAINYINHL 232
            |.:||  .:.:..|..|.||||.||.::|.|.|.|||.|| |.|:..|.:|||:||.|.|||..|
  Rat    82 RSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLP-SFPDDTKLTKIETLRFAYNYIWAL 145

  Fly   233 QAMLRESSVGQNGNG---------CCAWSGGSSSPYDNGNDHWGA 268
            ...||.:..|..|.|         |.....|..||..: .:.||:
  Rat   146 AETLRLADQGLPGGGARERLLPPQCVPCLPGPPSPASD-TESWGS 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sageNP_524287.1 HLH 181..233 CDD:278439 28/51 (55%)
Neurog1NP_062080.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..84 1/1 (100%)
bHLH_TS_NGN1_NeuroD3 83..154 CDD:381559 33/71 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3898
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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