DRSC/TRiP Functional Genomics Resources

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Protein Alignment sage and Tcf21

DIOPT Version :10

Sequence 1:NP_524287.1 Gene:sage / 41105 FlyBaseID:FBgn0037672 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_001027569.1 Gene:Tcf21 / 252856 RGDID:620523 Length:179 Species:Rattus norvegicus


Alignment Length:92 Identity:31/92 - (33%)
Similarity:49/92 - (53%) Gaps:20/92 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 QMEKDYRRTACD-RERTRMRDMNRAFDLLRSKLPISKPNGKKYSKIESLRIAINYINHLQAMLRE 238
            |..|..:|.|.: |||.|||.:::||..|::.||...|: .|.||:::||:|.:||.||:.:|  
  Rat    74 QEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWVPPD-TKLSKLDTLRLASSYIAHLRQIL-- 135

  Fly   239 SSVGQNGNGCCAWSGGSSSPYDNGNDH 265
                            ::..|:||..|
  Rat   136 ----------------ANDKYENGYIH 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sageNP_524287.1 bHLH_TS 181..236 CDD:381396 24/55 (44%)
Tcf21NP_001027569.1 bHLH_TS_TCF21_capsulin 77..140 CDD:381547 26/81 (32%)

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