DRSC/TRiP Functional Genomics Resources

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Protein Alignment sage and hlh-17

DIOPT Version :9

Sequence 1:NP_524287.1 Gene:sage / 41105 FlyBaseID:FBgn0037672 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_502928.3 Gene:hlh-17 / 185460 WormBaseID:WBGene00001961 Length:101 Species:Caenorhabditis elegans


Alignment Length:56 Identity:22/56 - (39%)
Similarity:32/56 - (57%) Gaps:1/56 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 RERTRMRDMNRAFDLLRSKLPISKPNG-KKYSKIESLRIAINYINHLQAMLRESSV 241
            |||.||.|:|.|.|.||:.:|.:.... :|.|||.:|.:|.|:|......:.|.|:
 Worm    22 RERCRMHDLNEALDDLRAVIPYAHGGSVRKLSKIATLLLAKNHIIMQAKAIEELSI 77

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sageNP_524287.1 HLH 181..233 CDD:278439 20/46 (43%)
hlh-17NP_502928.3 bHLH_TS_bHLHe22_like 16..76 CDD:381474 21/53 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3898
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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