DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sage and Ascl1

DIOPT Version :10

Sequence 1:NP_524287.1 Gene:sage / 41105 FlyBaseID:FBgn0037672 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_032579.2 Gene:Ascl1 / 17172 MGIID:96919 Length:231 Species:Mus musculus


Alignment Length:268 Identity:64/268 - (23%)
Similarity:89/268 - (33%) Gaps:92/268 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LSSTAGVPGDPP-PVLVPVS---ATTGGPYLSGGSEGEAESSEQPVLLELGAPQSSSCPAVSLNY 66
            :.|.||....|| |.|.|.:   ||......:..:..::...:||......|||.|.        
Mouse     7 MESGAGQQPQPPQPFLPPAACFFATAAAAAAAAAAAAQSAQQQQPQAPPQQAPQLSP-------- 63

  Fly    67 TLTADGAGLLAYAPTHPHSYSPSVMGGYEKEAHNMGLLPPTYSVIPQPVSMWHAGQV---ATGSP 128
              .||.              .||  ||..|.|                     |.||   .:.||
Mouse    64 --VADS--------------QPS--GGGHKSA---------------------AKQVKRQRSSSP 89

  Fly   129 VGLECNKPSELVPPPMYMSYSGGSIANSTEVDIAKEHNPAWREKALQMEKDYRRTACDRERTRMR 193
            ..:.|.:       .:..|..|.|:.......:|:.:                    :|||.|::
Mouse    90 ELMRCKR-------RLNFSGFGYSLPQQQPAAVARRN--------------------ERERNRVK 127

  Fly   194 DMNRAFDLLRSKLPISKPNGKKYSKIESLRIAINYINHLQAMLRESSVGQNGNGCCAWSGGSSSP 258
            .:|..|..||..:|....| ||.||:|:||.|:.||..||.:|.|.....     .|:..|..||
Mouse   128 LVNLGFATLREHVPNGAAN-KKMSKVETLRSAVEYIRALQQLLDEHDAVS-----AAFQAGVLSP 186

  Fly   259 -----YDN 261
                 |.|
Mouse   187 TISPNYSN 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sageNP_524287.1 bHLH_TS 181..236 CDD:381396 22/54 (41%)
Ascl1NP_032579.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24 7/16 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..92 19/99 (19%)
bHLH_TS_ASCL1_Mash1 110..180 CDD:381585 26/95 (27%)

Return to query results.
Submit another query.