DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sage and neurod6b

DIOPT Version :9

Sequence 1:NP_524287.1 Gene:sage / 41105 FlyBaseID:FBgn0037672 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_001296772.1 Gene:neurod6b / 114415 ZFINID:ZDB-GENE-010608-2 Length:332 Species:Danio rerio


Alignment Length:100 Identity:33/100 - (33%)
Similarity:48/100 - (48%) Gaps:28/100 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 NSTEVDIAKEHNPAWREKALQMEKD------------------------YRRTACDRERTRMRDM 195
            :|.|:..|::.|.. ||:..:.|:|                        .|:.|..|||:||..:
Zfish    46 SSAELKEAEDDNTD-REEEEEREEDENGLPKKKGPRKKKSEGRGDRVKMRRQEANARERSRMHGL 109

  Fly   196 NRAFDLLRSKLP-ISKPNGKKYSKIESLRIAINYI 229
            |.|.:.||..:| .||.  :|.||||:||:|.|||
Zfish   110 NDALESLRKVVPCYSKT--QKLSKIETLRLAKNYI 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sageNP_524287.1 HLH 181..233 CDD:278439 24/49 (49%)
neurod6bNP_001296772.1 HLH 92..150 CDD:238036 24/52 (46%)
Neuro_bHLH 152..271 CDD:289310
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3898
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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