DRSC/TRiP Functional Genomics Resources

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Protein Alignment sage and neurod6b

DIOPT Version :10

Sequence 1:NP_524287.1 Gene:sage / 41105 FlyBaseID:FBgn0037672 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_001296772.1 Gene:neurod6b / 114415 ZFINID:ZDB-GENE-010608-2 Length:332 Species:Danio rerio


Alignment Length:100 Identity:33/100 - (33%)
Similarity:48/100 - (48%) Gaps:28/100 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 NSTEVDIAKEHNPAWREKALQMEKD------------------------YRRTACDRERTRMRDM 195
            :|.|:..|::.|.. ||:..:.|:|                        .|:.|..|||:||..:
Zfish    46 SSAELKEAEDDNTD-REEEEEREEDENGLPKKKGPRKKKSEGRGDRVKMRRQEANARERSRMHGL 109

  Fly   196 NRAFDLLRSKLP-ISKPNGKKYSKIESLRIAINYI 229
            |.|.:.||..:| .||.  :|.||||:||:|.|||
Zfish   110 NDALESLRKVVPCYSKT--QKLSKIETLRLAKNYI 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sageNP_524287.1 bHLH_TS 181..236 CDD:381396 24/49 (49%)
neurod6bNP_001296772.1 bHLH_TS_NeuroD6_ATOH2 84..150 CDD:381565 24/60 (40%)
Neuro_bHLH 152..271 CDD:463621
Blue background indicates that the domain is not in the aligned region.

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