DRSC/TRiP Functional Genomics Resources

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Protein Alignment sage and olig1

DIOPT Version :9

Sequence 1:NP_524287.1 Gene:sage / 41105 FlyBaseID:FBgn0037672 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_001018632.1 Gene:olig1 / 100001484 ZFINID:ZDB-GENE-050107-2 Length:235 Species:Danio rerio


Alignment Length:139 Identity:41/139 - (29%)
Similarity:65/139 - (46%) Gaps:31/139 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 ELVPPPMYMSYSGGSIAN--STEVDIAKEHNPAWREKALQMEKDYRRTACDRERTRMRDMNRAFD 200
            :|:|..:.::.|||..:|  |.:..:.....|  ||.:.:.:::.||....|||.||:|:|.|.|
Zfish    19 QLMPRMVRVTGSGGPGSNVGSLQGPLRSSKPP--RELSSEEQQELRRKINSRERKRMQDLNVAMD 81

  Fly   201 LLRSKL--------------------PISKPNGKKYSKIESLRIAINYI----NHLQAMLR---E 238
            .||..:                    |.:...|::.|||.:|.:|.|||    :.||.|.|   |
Zfish    82 ALREVMVPYSSSPTGVGGALQHPYFPPGAPTTGRRLSKISTLVLARNYILLLGSSLQEMRRLLGE 146

  Fly   239 SSVGQNGNG 247
            .|:|...:|
Zfish   147 VSIGMGVSG 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sageNP_524287.1 HLH 181..233 CDD:278439 23/75 (31%)
olig1NP_001018632.1 HLH domain 62..139 24/76 (32%)
HLH 62..133 CDD:278439 23/70 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3898
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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