DRSC/TRiP Functional Genomics Resources

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Protein Alignment sage and olig1

DIOPT Version :10

Sequence 1:NP_524287.1 Gene:sage / 41105 FlyBaseID:FBgn0037672 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_001018632.1 Gene:olig1 / 100001484 ZFINID:ZDB-GENE-050107-2 Length:235 Species:Danio rerio


Alignment Length:139 Identity:41/139 - (29%)
Similarity:65/139 - (46%) Gaps:31/139 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 ELVPPPMYMSYSGGSIAN--STEVDIAKEHNPAWREKALQMEKDYRRTACDRERTRMRDMNRAFD 200
            :|:|..:.::.|||..:|  |.:..:.....|  ||.:.:.:::.||....|||.||:|:|.|.|
Zfish    19 QLMPRMVRVTGSGGPGSNVGSLQGPLRSSKPP--RELSSEEQQELRRKINSRERKRMQDLNVAMD 81

  Fly   201 LLRSKL--------------------PISKPNGKKYSKIESLRIAINYI----NHLQAMLR---E 238
            .||..:                    |.:...|::.|||.:|.:|.|||    :.||.|.|   |
Zfish    82 ALREVMVPYSSSPTGVGGALQHPYFPPGAPTTGRRLSKISTLVLARNYILLLGSSLQEMRRLLGE 146

  Fly   239 SSVGQNGNG 247
            .|:|...:|
Zfish   147 VSIGMGVSG 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sageNP_524287.1 bHLH_TS 181..236 CDD:381396 25/78 (32%)
olig1NP_001018632.1 bHLH_SF 56..144 CDD:469605 27/87 (31%)
HLH domain 62..139 24/76 (32%)

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