DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16736 and Bmcp

DIOPT Version :9

Sequence 1:NP_649873.1 Gene:CG16736 / 41101 FlyBaseID:FBgn0037668 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_648501.1 Gene:Bmcp / 39322 FlyBaseID:FBgn0036199 Length:303 Species:Drosophila melanogaster


Alignment Length:318 Identity:61/318 - (19%)
Similarity:111/318 - (34%) Gaps:74/318 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PVYVGLLIKTTAQLLSHPMEL--VRVNMQANVIHHSRLSINH------MFRLMARHGLPGFYYGI 58
            |...|.:...||:..:.|::.  .|:.:|...|..|...:.:      ..::....||...|.||
  Fly     9 PFVYGGVASITAEFGTFPIDTTKTRLQIQGQKIDQSFSQLRYRGMTDAFVKISREEGLRALYSGI 73

  Fly    59 VAACLRCTVHTMSTYTLFYNLQD--NKYVLMLQPYNTSMVLGITGFWGGVLATPFA---KLAVIR 118
            ..|.||...:....:..:|.|:.  |:..|::....:..|      |..:|....|   ..|:..
  Fly    74 WPAVLRQATYGTIKFGTYYTLKKLANERGLLINEDGSERV------WSNILCAAAAGAISSAIAN 132

  Fly   119 QADLTR------------------GS-YERRNYRNFWRGLKCMYAKGGFTYLFTGWKINSISSTA 164
            ..|:.:                  |. |:....|..|||:       |.|         :..:..
  Fly   133 PTDVLKVRMQVHGKGQHKGLLGCFGEIYKYEGVRGLWRGV-------GPT---------AQRAVV 181

  Fly   165 VAVLYTPISD--KVHTVISWFHRLDEPWLSDLITMALTGSIITVIMTPVDALATLTLNE------ 221
            :|.:..|:.|  |:..:.::...:...::|..|  |..||.|.  .||:|.:.|..:|:      
  Fly   182 IASVELPVYDFCKLQLMNAFGDHVGNHFISSFI--ASLGSAIA--STPIDVIRTRLMNQRPVSIT 242

  Fly   222 -SSHYGRTSYPYLYR-------KIIRKHGYKGFFFGWKPALMALIPHTVLATFVYRFL 271
             :......:.|.||.       :.||..|....:.|:.|..:.:.|..::....|..|
  Fly   243 MNGVVTAAATPKLYSGSLDCAVQTIRNEGLPALYKGFIPTWVRMGPWNIIFFITYEQL 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16736NP_649873.1 Mito_carr 6..81 CDD:278578 18/82 (22%)
Mito_carr 187..277 CDD:278578 22/99 (22%)
BmcpNP_648501.1 Mito_carr 7..97 CDD:278578 19/87 (22%)
Mito_carr <132..199 CDD:278578 13/82 (16%)
Mito_carr 204..303 CDD:278578 22/101 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441970
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0759
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45618
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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