DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pum and MPT5

DIOPT Version :9

Sequence 1:NP_001262403.1 Gene:pum / 41094 FlyBaseID:FBgn0003165 Length:1533 Species:Drosophila melanogaster
Sequence 2:NP_011337.1 Gene:MPT5 / 852697 SGDID:S000003146 Length:859 Species:Saccharomyces cerevisiae


Alignment Length:609 Identity:153/609 - (25%)
Similarity:260/609 - (42%) Gaps:158/609 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   971 SASPLGAPITPPPSAQSCLLGSRAPGAESRQRQQQQQQLAAVGLPATAAAAQAAVAAAANNMFGS 1035
            |...|..|:||||..|          ..:::..|:...|...|.....::.|:.:|...|....:
Yeast    38 SVQSLLEPVTPPPLGQ----------MNNKRNHQKAHSLDLSGFNQFISSTQSPLALMNNTSTSN 92

  Fly  1036 NSSIFS-NPLAIPGTAAVAAAAA----------------------------AAAAANS------- 1064
            :::.|| ||.|...:..::|:.|                            ..|.:||       
Yeast    93 SANSFSPNPNAASNSTGLSASMANPPAILPLINEFDLEMDGPRRKSSHDFTVVAPSNSGVNTSSL 157

  Fly  1065 --RQVAATAAAAAAV--------AAAAGGVG----GAPQPGRSRLLEDFRNQRYPNLQLRDLANH 1115
              ...:::...||::        ||:..||.    |......|.::|      ...|.||||  .
Yeast   158 IMETPSSSVTPAASLRNFSNSNNAASKCGVDNSSFGLSSSTSSSMVE------ISALPLRDL--D 214

  Fly  1116 IVEFSQDQHGSRFIQQKLERATAAEKQMV----FSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQ 1176
            .::.:.||.|.||:|:|||  |.:|..||    :.:|......|:.|.||||::||..::.|.||
Yeast   215 YIKLATDQFGCRFLQKKLE--TPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCDYLTAEQ 277

  Fly  1177 KNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDG---------HVLKCVKDQN 1232
            |..|...:..:|.|:::..||.|.:||.::::..|.|.:::  :.|         .|:..:.|.|
Yeast   278 KTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLI--IKGFSQEFTSIEQVVTLINDLN 340

  Fly  1233 GNHVVQKCIECVDPVALQFIINAF--KGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEH 1295
            ||||:||||....|....|||:|.  :..:.::|||.:||.|:|::|..||.:|...|..::.:.
Yeast   341 GNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVCTLQQIFKISVKIVQF 405

  Fly  1296 TEQLIQDQYGNYVIQHVLEHGKQEDKSI---LINSVRGKVLVLSQHKFASNVVEKCVTHATR--- 1354
            ...||.||:|||:||.:|:. |:.|..:   |.|.:..::..||..||:||||||.:....|   
Yeast   406 LPGLINDQFGNYIIQFLLDI-KELDFYLLAELFNRLSNELCQLSCLKFSSNVVEKFIKKLFRIIT 469

  Fly  1355 ----------GERTGLI-DEVCTFNDNA-----------LHVMMKDQYANYVVQKMIDV------ 1391
                      .:||.:. |:|...:.|.           |:|:::|.:.||.:|.::||      
Yeast   470 GFIVNNNGGASQRTAVASDDVINASMNILLTTIDIFTVNLNVLIRDNFGNYALQTLLDVKNYSPL 534

  Fly  1392 -------------SEPT------------QLKKLMTKIRPHMAALRKYTYGKHINAKLEKYYMKI 1431
                         |..|            ::..|:...:..:.:::..:|.|.|..|::.|    
Yeast   535 LAYNKNSNAIGQNSSSTLNYGNFCNDFSLKIGNLIVLTKELLPSIKTTSYAKKIKLKVKAY---- 595

  Fly  1432 TNPITVGTGAGGVPAASSAAAVSS 1455
                   ..|.|:|....:..|::
Yeast   596 -------AEATGIPFTDISPQVTA 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pumNP_001262403.1 Pumilio 1106..1424 CDD:153420 114/391 (29%)
MPT5NP_011337.1 COG5099 49..848 CDD:227430 148/598 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5099
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1682
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000719
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.720

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