DRSC/TRiP Functional Genomics Resources

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Protein Alignment pum and PUM7

DIOPT Version :9

Sequence 1:NP_001262403.1 Gene:pum / 41094 FlyBaseID:FBgn0003165 Length:1533 Species:Drosophila melanogaster
Sequence 2:NP_001322141.1 Gene:PUM7 / 844152 AraportID:AT1G78160 Length:652 Species:Arabidopsis thaliana


Alignment Length:544 Identity:129/544 - (23%)
Similarity:244/544 - (44%) Gaps:80/544 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   903 FDRSTSAFSPSTMDYTSSGVAAA--ANAVNSTVAQAAAAAAAAAAARGKWPGAMSGAASGAYG-- 963
            ::.|...:.||...:.|.|....  .....|::.|:.|:.:....::......|.|.....:|  
plant   155 YNFSPKHYEPSNGGFVSGGFPYGFFRPPKESSINQSCASWSGFDQSKNDDKRNMFGNNPQQFGWP 219

  Fly   964 ALGAGNASASPLG---------------APITPPPSAQSCLLGSRAPGAESRQRQQQQQQLAAVG 1013
            :..:.|:..||..               :..:||..            .|...:.|..:...:..
plant   220 SYSSSNSGTSPYNNGQEIFENRGGMREYSAYSPPHQ------------PEVSYKHQNYRTTTSDI 272

  Fly  1014 LPATAAAAQAAVAAAANNMFGSNSSIFSNPLAIPGTAAVAAAAAAAAAANSRQVAATAAAAAAVA 1078
            ||......|..:.:..:..|.|:.|.|.|..:|.           ...:|:|.:.:.        
plant   273 LPLFCQRTQVPMVSKCSEPFSSDESFFMNGKSID-----------HQRSNTRALMSN-------- 318

  Fly  1079 AAAGGVGGAPQPGRSRLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQM 1143
                  .|.|        .:..:...||  :.|:..::...::||||.||:|:..:..|:.:..:
plant   319 ------NGNP--------TEICHPSLPN--MCDIQGYVYLMAKDQHGCRFLQRIFDEGTSVDAMI 367

  Fly  1144 VFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTL---GMQVKGHVLQLALQMYGCRVIQKAL 1205
            :|:|::|....||.|.||||::||..:..|.||:..:   ..:..|.:::::|..||.||:|:.:
plant   368 IFNEVIAHVVELMMDPFGNYLMQKLLDVCTEEQRTQIVLVATEEPGQLIRISLNAYGTRVVQRLV 432

  Fly  1206 ESISPEQQQEIVH-ELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYG 1269
            |:|...:|..:|. .|....|..:||.|||||:|:|::|:.....:||.:|.......::||.:|
plant   433 ETIRSGKQISLVKLALRPGFLDLIKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHG 497

  Fly  1270 CRVIQRILEHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLV 1334
            |.|:|:.:.:...:|...::.|:..::..|.||.:|||.:|.|:|.......::::..::|..:.
plant   498 CCVLQKCIAYSMRQQREKLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQ 562

  Fly  1335 LSQHKFASNVVEKCVTHATRGERTGLIDEVCT---FNDNALHVMMKDQYANYVVQKMIDVSEPTQ 1396
            ||..||:|::||:|:.|... .|..::.|:.:   |:.     :::|.|||:|:|..:..::...
plant   563 LSMQKFSSHMVERCLMHCPE-SRPQIVRELVSVPHFDQ-----LLQDPYANFVIQAALAATKGPL 621

  Fly  1397 LKKLMTKIRPHMAALRKYTYGKHI 1420
            ...|:..|||| :.||...|.|.|
plant   622 HASLVEVIRPH-SILRNNPYCKRI 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pumNP_001262403.1 Pumilio 1106..1424 CDD:153420 97/322 (30%)
PUM7NP_001322141.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5099
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000719
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.770

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