Protein Alignment pum and PUM20

DIOPT Version :10

• Sequence 1: NP_524285.2
• Gene: pum / 41094
• FlyBaseID: FBgn0003165
• Length: 1533
• Species: Drosophila melanogaster
• Sequence 2: NP_173581.1
• Gene: PUM20 / 838764
• AraportID: AT1G21620
• Length: 308
• Species: Arabidopsis thaliana
• Alignment Length: 289
• Identity: 70/289 - (24%)
• Similarity: 128/289 - (44%)
• Gaps: 65/289 - (22%)

  Fly  1162 NYVIQKFFEFGTPEQKNTLGMQVKGHVLQLAL--QMYGCRVIQKALESISPEQQQEIVHELDGHV 1224
            ||   .|....||::   |.|:     ||:|:  ||.. ::.|:.|::::     .::.....:.
plant    47 NY---SFLAALTPQE---LEMR-----LQIAMDVQMIS-KLDQRKLQTMA-----SLLTSDPDYF 94

  Fly  1225 LKCVKDQNGNHVVQKCIECVDPVALQF---IINAFKGQVYSLSTHPYGCRVIQR----------- 1275
            |...::.||:..:||.:...|.|...|   |:..|    ..:.|..|...|::|
plant    95 LMIARNMNGSKRIQKLLGKTDDVDALFAAAILRRF----LHIITDKYASYVVRRGMTVFDKKKKK 155

  Fly  1276 -ILEHCTAEQTTPILDELH--------EHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGK 1331
             :.||.           ||        :|...|..|.|||:|||.||:......|:.::.|:||.
plant   156 AMYEHI-----------LHYASHIARDKHALVLSNDAYGNFVIQRVLKLNDLRSKNNIVVSLRGH 209

  Fly  1332 VLVLSQHKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQ 1396
            .:.||..|:.|.||:  |...|:.....:::|:.....:.|..:.:::|.|::|.|.:.|::...
plant   210 FVDLSFQKYGSYVVD--VLLETKESMVVVVEELMECEGDMLMRLARNEYGNFLVCKALRVTQKEM 272

  Fly  1397 LKK-----LMTKIRPHMAALRKYTYGKHI 1420
            ::.     |:.|::|....|| ::.||:|
plant   273 VRTDLFWGLVHKLKPFHNLLR-WSRGKNI 300

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pum	NP_524285.2	Pumilio	1106..1424	CDD:153420	70/289 (24%)
PUM20	NP_173581.1	Pumilio	<92..304	CDD:480718	56/227 (25%)