Protein Alignment pum and PUM5

DIOPT Version :10

• Sequence 1: NP_524285.2
• Gene: pum / 41094
• FlyBaseID: FBgn0003165
• Length: 1533
• Species: Drosophila melanogaster
• Sequence 2: NP_001327304.1
• Gene: PUM5 / 821569
• AraportID: AT3G20250
• Length: 949
• Species: Arabidopsis thaliana
• Alignment Length: 1050
• Identity: 326/1050 - (31%)
• Similarity: 459/1050 - (43%)
• Gaps: 251/1050 - (23%)

  Fly   468 SGSPTNK--------DSSLSGLEPHLRNLKFDDNDKSRDDKEKANSPFDTNGLKKDDQVTNSNGV 524
            ||..|.|        ..|:.|....||||.......|.:...:|...:|:     ::::.:....
plant    49 SGDQTGKFPSRSESAPPSMEGSFAALRNLLKQQEGSSSEVLSRAIENYDS-----EEEIRSDPAY 108

  Fly   525 VNGIDDDKGFNRTPGSRQPSPAEESQPRPPNLLFPPL--PFNHMLMDHGQGMGGGLGGVVGSGNG 587
            |.....:...|               ||.|    |||  ..|..|:.|   .|........|.:.
plant   109 VAYYLSNINLN---------------PRLP----PPLISRENQHLLRH---FGDNNQSPTTSWDN 151

  Fly   588 VGGGSGGGGAGGAYAAH------------QQMAAQMS--------QLQPPMMNGVGGGMPMAAQS 632
            :|..|....:..|.:.|            ||..|.::        .:|.|..   .|..|:|...
plant   152 MGIRSSLHSSRTALSTHREEPEDEASSGEQQSYASLAGRRKSIADMIQRPHS---AGNRPIAQDI 213

  Fly   633 PMLNHQAAGPNHMESPG------NLLQQQNFDVQQLFRSQNPGLAAVA----TNAAAAAAAAAAA 687
            ..::...:..:....|.      |||::.:........|::|....:|    |||......|..|
plant   214 HAISSDTSSEHARRLPESDINSVNLLRETDSLSSDAIASEDPFTTDLASQSFTNAQTERLNARQA 278

  Fly   688 TSAASAAAAVGAPPVPNGSLQQSQQQQQQQQQQQQQQQMHMAAASQQFLAAQQQAQNAAYAAQQA 752
            :...:..:..||.|   .|...|:.::.|:.||.|.::|     ..|:..:..|.|  |.:.||.
plant   279 SHEDNNLSVFGASP---PSSVASRMRRNQEDQQSQGRRM-----PPQYTPSSYQVQ--ASSPQQM 333

  Fly   753 TSYVINPGQEAAPYMGMIAAA------QMPYYGVAPWGMY--------------------PGNLI 791
            :...|...|:....:..||..      |.| :|:||..||                    .|..:
plant   334 SYPRIGGTQDMMQSLPKIATGEVHSTFQSP-HGLAPPPMYTSTAAYMTSLSPFYHQNFQSSGMFV 397

  Fly   792 PQQ---GTQPRRPLTPSQQGAENQPYQVIPAFLDHTGSLLMGGPRTGTPMRLVSPAPVLVPPGAT 853
            ||.   |..|...:.|          |.:..:..|..::.|....:.|.....:|.   :.||.:
plant   398 PQYNYGGYPPASGIVP----------QYMSGYPSHEATVPMPYDISSTSSGYNNPR---LLPGVS 449

  Fly   854 RAGPPPPQGPQLYQPQP-QTAQQNLYSQQNGSSVGGLALNTSSLTGRRDSFDRSTSAFSPSTMDY 917
            .:|...|.....:|.|. |.||.:.|:                     ..|..||.:|...  |.
plant   450 SSGQNIPSLVDPFQLQYFQQAQVDAYA---------------------PPFQSSTDSFGQK--DQ 491

  Fly   918 TSSGVAAAANAVNSTVAQAAAAAAAAAAARGKWPGAMSGAASGAYGALGAG-----NASASPLGA 977
            .:.|..|....:||.::...              |..|....|.|.|:..|     ....|||.:
plant   492 QAVGYMANHEPLNSPLSPGY--------------GLQSPRHMGNYFAVPPGVRVMPQYPGSPLAS 542

  Fly   978 PITP--PPSAQSCLLGSRAPGAESRQRQQQQQQLAAVGLPATAAAAQAAVAAAANNMFGSNSSIF 1040
            |:.|  |........|.|   :|:|..||...:                           |:.|:
plant   543 PVMPSSPVGGMMSHFGRR---SETRYHQQGPSR---------------------------NTGIY 577

  Fly  1041 SNPLAIPGTAAVAAAAAAAAAANSRQVAATAAAAAAVAAAAGGVGGAPQPGRSRLLEDFRNQRY- 1104
                  ||                              ...|..|||     |.:::|.:...:
plant   578 ------PG------------------------------GWQGNRGGA-----SSIVDDLKRHSFL 601

  Fly  1105 -----PN---LQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFG 1161
                 ||   |:|.|:|..:||||.|||||||||||||..:..||..||||:|..|..|||||||
plant   602 DELKSPNARKLELSDIAGRVVEFSVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFG 666

  Fly  1162 NYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLK 1226
            |||||||.|.|||.|:..|..|:.|.::.|:||||||||||||||.|..:|:.|::.||||:|||
plant   667 NYVIQKFIEHGTPAQREELVKQLAGQMVSLSLQMYGCRVIQKALEVIDVDQKTELIRELDGNVLK 731

  Fly  1227 CVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCT-AEQTTPILD 1290
            ||:|||||||:|||||.:....:.|:|.||:|||.:||||||||||||||||||: .|:|..|:|
plant   732 CVRDQNGNHVIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIID 796

  Fly  1291 ELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRG 1355
            |:.|....|..|||||||.|||||.||.:::..:|..:.|.|:.:||||:||||||||:.||...
plant   797 EILESAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHADST 861

  Fly  1356 ERTGLIDEVC--TFNDNALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGK 1418
            ||..||:|:.  :..||.|..|||||:|||||||::::|:..|.:.|:.:::.|:.:||||||||
plant   862 EREFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVLEISKDQQREILVQRMKIHLQSLRKYTYGK 926

  Fly  1419 HINAKLEKYY 1428
            ||.|:.|:.:
plant   927 HIVARFEQLF 936

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pum	NP_524285.2	Pumilio	1106..1424	CDD:153420	189/323 (59%)
PUM5	NP_001327304.1	COG5099	194..935	CDD:227430	293/875 (33%)
		Pumilio	611..931	CDD:153420	187/319 (59%)